RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RPS11P62280 158 aaKnown RBP eCLIP20.26■□□□□ 0.83
CCDC9-201ENST00000221922 CDONQ4KMG0 1287 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 HSD17B12Q53GQ0 312 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 CD276Q5ZPR3 534 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 BAIAP2L2Q6UXY1 529 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 SIAH3Q8IW03 269 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 BMPERQ8N8U9 685 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 OR4D9Q8NGE8 314 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 LANCL2Q9NS86 450 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 CUTCQ9NTM9 273 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 SLCO1C1Q9NYB5 712 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 STMN3Q9NZ72 180 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 TRIOBPQ9H2D6 2365 aa20.26■□□□□ 0.83
CCDC9-201ENST00000221922 ANKRD61A6NGH8 418 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 MCIDASD6RGH6 385 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 ARPC3O15145 178 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 BCAT2O15382 392 aaPredicted RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 FLRT2O43155 660 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 GSTZ1O43708 216 aaPredicted RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 GATBO75879 557 aaKnown RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 CD3GP09693 182 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 PNMTP11086 282 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 SNRPBP14678 240 aaKnown RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 HPGDP15428 266 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 GBX2P52951 348 aaPredicted RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 PRPS1P60891 318 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 SIRPAP78324 504 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 DGCR2P98153 550 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 WBP2NLQ6ICG8 309 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 OVCH1Q7RTY7 1134 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 ZMYND19Q96E35 227 aaPredicted RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 MVB12AQ96EY5 273 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 MRPL48Q96GC5 212 aaKnown RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 C7orf50Q9BRJ6 194 aaKnown RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 CAMK2AQ9UQM7 478 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 TEX13CA0A0J9YWL9 993 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 PPICP45877 212 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 RAG2P55895 527 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 OR1D5P58170 312 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 HSD11B2P80365 405 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 KCNAB1Q14722 419 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 SLC35D3Q5M8T2 416 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 RPL22L1Q6P5R6 122 aaKnown RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 ADAMTS14Q8WXS8 1223 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 PHF21AQ96BD5 680 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 GPR137Q96N19 417 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 SLC46A1Q96NT5 459 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 OR1F2PQ96R84 312 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 DUSP15Q9H1R2 295 aaPredicted RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 OR51J1Q9H342 316 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 RANBP3Q9H6Z4 567 aaPredicted RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 ZFP64Q9NPA5 681 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 EXOSC3Q9NQT5 275 aaKnown RBP20.25■□□□□ 0.83
CCDC9-201ENST00000221922 SLC23A1Q9UHI7 598 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 SPATA2Q9UM82 520 aa20.25■□□□□ 0.83
CCDC9-201ENST00000221922 ELOA3DA6NLF2 546 aaPredicted RBP20.24■□□□□ 0.83
CCDC9-201ENST00000221922 LRRN3E7EW58 273 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 K7ESF4 209 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 CTDSPLO15194 276 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 IL33O95760 270 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 PON3Q15166 354 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 ELOA3BQ3SY89 546 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 WDR45BQ5MNZ6 344 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 FNDC7Q5VTL7 733 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 C7orf57Q8NEG2 295 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 ELOA3Q8NG57 546 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 CMTM3Q96MX0 182 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 CACNG6Q9BXT2 260 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 LRRN3Q9H3W5 708 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 BRD7Q9NPI1 651 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 ZNF275Q9NSD4 429 aaPredicted RBP20.24■□□□□ 0.83
CCDC9-201ENST00000221922 PTTG3PQ9NZH4 202 aa20.24■□□□□ 0.83
CCDC9-201ENST00000221922 MRTO4Q9UKD2 239 aaKnown RBP20.24■□□□□ 0.83
CCDC9-201ENST00000221922 A0A0B4J203 849 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 SCDO00767 359 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 DUX1O43812 170 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 UBL4AP11441 157 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 GIFP27352 417 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 RORAP35398 523 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 RPS4XP62701 263 aaKnown RBP20.23■□□□□ 0.83
CCDC9-201ENST00000221922 SYT9Q86SS6 491 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 PLXDC1Q8IUK5 500 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 SLC35F2Q8IXU6 374 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 ZSCAN1Q8NBB4 408 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 PTPMT1Q8WUK0 201 aaPredicted RBP20.23■□□□□ 0.83
CCDC9-201ENST00000221922 GPX7Q96SL4 187 aaPredicted RBP20.23■□□□□ 0.83
CCDC9-201ENST00000221922 NRIP3Q9NQ35 241 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 PNO1Q9NRX1 252 aaKnown RBP20.23■□□□□ 0.83
CCDC9-201ENST00000221922 SEMA5BQ9P283 1151 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.23■□□□□ 0.83
CCDC9-201ENST00000221922 A0A1W2PPK0 400 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 MAGEB4O15481 346 aaPredicted RBP20.23■□□□□ 0.83
CCDC9-201ENST00000221922 CXCL12P48061 93 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 SLC37A1P57057 533 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 UNQ9370/PRO34162Q6UXP9 181 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 OR14A16Q8NHC5 309 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 PHYHIPQ92561 330 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 ZFP3Q96NJ6 502 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 CLEC4AQ9UMR7 237 aa20.23■□□□□ 0.83
CCDC9-201ENST00000221922 ANXA3P12429 323 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms