RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TRIM23P36406 574 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC6A8P48029 635 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 PKDCCQ504Y2 493 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 LYSMD4Q5XG99 296 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SYT9Q86SS6 491 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 LRRC28Q86X40 367 aaPredicted RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 MRPL43Q8N983 215 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 LIPHQ8WWY8 451 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 ST8SIA2Q92186 375 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 NXPE3Q969Y0 559 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC6A18Q96N87 628 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 WDR83Q9BRX9 315 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 NXT1Q9UKK6 140 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 ARNTLO00327 626 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 NPY4RP50391 375 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 CASP6P55212 293 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 TNFRSF17Q02223 184 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 KIR2DS3Q14952 304 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SF3B4Q15427 424 aaKnown RBP eCLIP12.61□□□□□ -0.396e-8■□□□□ 8.6
TGFBR3-201ENST00000212355 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 ALKAL1Q6UXT8 129 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 GDF7Q7Z4P5 450 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 MRPL41Q8IXM3 137 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 NANOS1Q8WY41 292 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 TRAPPC2LQ9UL33 140 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC35A3Q9Y2D2 325 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 TRAPPC2LH3BP13 241 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 UTS2O95399 124 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 EN2P19622 333 aaPredicted RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 CD6P30203 668 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 GIPRP48546 466 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 ADPRMQ3LIE5 342 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 KCTD11Q693B1 232 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SFXN4Q6P4A7 337 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 CBARPQ8N350 705 aaPredicted RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 C19orf47Q8N9M1 422 aaKnown RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 PRSS16Q9NQE7 514 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 PPT2Q9UMR5 302 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 USP3Q9Y6I4 520 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 NSG1A0A0A6YYJ2 146 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 OR2W5A6NFC9 320 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 HS3ST1O14792 307 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 IGHG1P01857 330 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 PFN3P60673 137 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 PDE7AQ13946 482 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 LDLRAD1Q5T700 205 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 GAREM2Q75VX8 874 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 LINC01599Q8WXQ3 324 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 NMNAT2Q9BZQ4 307 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 PPP1R14DQ9NXH3 145 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 HHLA2Q9UM44 414 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 ASB4Q9Y574 426 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 TMX2-CTNND1H3BSU7 103 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 BCAT2O15382 392 aaPredicted RBP12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 FAM69AQ5T7M9 428 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC16A14Q7RTX9 510 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 FUNDC1Q8IVP5 155 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 NICN1Q9BSH3 213 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 UBQLN4Q9NRR5 601 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 SEMA3BQ13214 749 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 SPACA5Q96QH8 159 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 USB1Q9BQ65 265 aaKnown RBP12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 CDCP1Q9H5V8 836 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 TNFRSF12AQ9NP84 129 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 TMEM82A0PJX8 343 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 CLDN24A6NM45 220 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 GPR75O95800 540 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 RD3LP0DJH9 198 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 SCGB2A2Q13296 93 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 OGFOD3Q6PK18 319 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 B3GNT9Q6UX72 402 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 TCTEX1D2Q8WW35 142 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 HPSE2Q8WWQ2 592 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 PSMF1Q92530 271 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 PSORS1C1Q9UIG5 152 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF264O43296 627 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 SGCEO43556 437 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 ETV1P50549 477 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 EMP3P54852 163 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 PRDX1Q06830 199 aaKnown RBP12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 NKAIN4Q8IVV8 208 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 MFSD9Q8NBP5 474 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 OR7G1Q8NGA0 311 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 A0A1W2PPV4 95 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 GAPDHSO14556 408 aaPredicted RBP12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 IFNA10P01566 189 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 BLVRBP30043 206 aaPredicted RBP12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 P2RX3P56373 397 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 RDH10Q8IZV5 341 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 TMEM106AQ96A25 262 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 PDXPQ96GD0 296 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 PRRT1Q99946 306 aa12.6□□□□□ -0.39
TGFBR3-201ENST00000212355 CHST8Q9H2A9 424 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms