RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 AP2S1P53680 142 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-233ENST00000642021 SNTA1Q13424 505 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 GPM6BQ13491 265 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 GGTLC2Q14390 218 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 COL28A1Q2UY09 1125 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 UBE2NLQ5JXB2 153 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 GPR139Q6DWJ6 353 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 FAM109BQ6ICB4 259 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-233ENST00000642021 FAAP20Q6NZ36 180 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 PARM1Q6UWI2 310 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 SEZ6L2Q6UXD5 910 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 SLC51BQ86UW2 128 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 OR6K6Q8NGW6 343 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 OR2T4Q8NH00 348 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 PMM1Q92871 262 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 HSPA12BQ96MM6 686 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 RBP7Q96R05 134 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 MYADMQ96S97 322 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 TRIM2Q9C040 744 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 SPRTNQ9H040 489 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-233ENST00000642021 FBXL21Q9UKT6 434 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 A0A1B0GVT2 93 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 A0A1W2PQF6 199 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 IFITM5A6NNB3 132 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 H3BUI4 141 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 SERPINI2O75830 405 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 ZFPL1O95159 310 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 PDGFAP04085 211 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 SPI1P17947 270 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 DPP4P27487 766 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 RBM34P42696 430 aaKnown RBP12.66□□□□□ -0.38
PHGDH-233ENST00000642021 CAPZA2P47755 286 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 ERVK-25P63136 954 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 PUDPQ08623 228 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 NFATC4Q14934 902 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 FGD2Q7Z6J4 655 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 POMGNT2Q8NAT1 580 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 CEP76Q8TAP6 659 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 HOXB13Q92826 284 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-233ENST00000642021 C7orf50Q9BRJ6 194 aaKnown RBP12.66□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF436Q9C0F3 470 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-233ENST00000642021 TSPAN10Q9H1Z9 355 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-233ENST00000642021 SCP2D1Q9UJQ7 156 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 SPEF1Q9Y4P9 236 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 NPTNQ9Y639 398 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 RNF215Q9Y6U7 377 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 A0A1B0GVI7 797 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 TGFBR3LH3BV60 316 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 PRKNO60260 465 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-233ENST00000642021 CA3P07451 260 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 NAGAP17050 411 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 HSF2Q03933 536 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 ULK3Q6PHR2 472 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF761Q86XN6 746 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-233ENST00000642021 RCBTB1Q8NDN9 531 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 BAHD1Q8TBE0 780 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-233ENST00000642021 NXPE2Q96DL1 559 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 WDR89Q96FK6 387 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-233ENST00000642021 CCDC120Q96HB5 630 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 SPACA7Q96KW9 195 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 TSSK2Q96PF2 358 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 DHRS9Q9BPW9 319 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 SFXN1Q9H9B4 322 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 C12orf10Q9HB07 376 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 PTTG3PQ9NZH4 202 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 RPS6KB2Q9UBS0 482 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 SPACA6W5XKT8 324 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 EYSQ5T1H1 3165 aa12.66□□□□□ -0.38
PHGDH-233ENST00000642021 PSMB1P20618 241 aaKnown RBP12.65□□□□□ -0.38
PHGDH-233ENST00000642021 KIAA1024LP59773 190 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 IKZF1Q13422 519 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 DEFB110Q30KQ9 67 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 IGSF11Q5DX21 431 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 CSNK1A1LQ8N752 337 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 FRMD1Q8N878 549 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF511Q8NB15 262 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 OR9A4Q8NGU2 314 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 OR4C3Q8NH37 302 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 PMEPA1Q969W9 287 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 SGTBQ96EQ0 304 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 WDR92Q96MX6 357 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 SEC22CQ9BRL7 303 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 CHIAQ9BZP6 476 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 ACTR6Q9GZN1 396 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 LIN7BQ9HAP6 207 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 LRIT1Q9P2V4 623 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 RWDD3Q9Y3V2 267 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 SPEGQ15772 3267 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 SPTBP11277 2137 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF879B4DU55 563 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 KHNYNO15037 678 aaKnown RBP12.65□□□□□ -0.38
PHGDH-233ENST00000642021 FOXS1O43638 330 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 OR10H2O60403 315 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 CDC123O75794 336 aaPredicted RBP12.65□□□□□ -0.38
PHGDH-233ENST00000642021 RAD52P43351 418 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 PTH2RP49190 550 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 ITPRIPL2Q3MIP1 535 aa12.65□□□□□ -0.38
PHGDH-233ENST00000642021 APOOLQ6UXV4 268 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms