RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PCDHGB1Q9Y5G3 927 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 SNX5Q9Y5X3 404 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 A0A0G2JMM0 328 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 A0A1W2PPB8 328 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 A0A1W2PRS3 328 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 IRGMA1A4Y4 181 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 KIR3DP1A8MWS1 328 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 MCIDASD6RGH6 385 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 LRRN3E7EW58 273 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 RGS10O43665 173 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 TLX2O43763 284 aaPredicted RBP13.85□□□□□ -0.19
CLN6-219ENST00000637329 NME2P1O60361 137 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 ENTPD6O75354 484 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 PPP1R3DO95685 299 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 TFAP2AP05549 437 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 HK1P19367 917 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 PAICSP22234 425 aaKnown RBP13.85□□□□□ -0.19
CLN6-219ENST00000637329 NME2P22392 152 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 GTF2E2P29084 291 aaKnown RBP13.85□□□□□ -0.19
CLN6-219ENST00000637329 RPL4P36578 427 aaKnown RBP13.85□□□□□ -0.19
CLN6-219ENST00000637329 SLC15A1P46059 708 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 DNASE1L1P49184 302 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 ST13P50502 369 aaKnown RBP13.85□□□□□ -0.19
CLN6-219ENST00000637329 MVKQ03426 396 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 ZNF91Q05481 1191 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 LTBQ06643 244 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 SRSF6Q13247 344 aaKnown RBP13.85□□□□□ -0.19
CLN6-219ENST00000637329 ALG10Q5BKT4 473 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 EMC4Q5J8M3 183 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 ZNF582Q96NG8 517 aaPredicted RBP13.85□□□□□ -0.19
CLN6-219ENST00000637329 SIGLEC12Q96PQ1 595 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 COPS4Q9BT78 406 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 TAPBPLQ9BX59 468 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 OR2B2Q9GZK3 357 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 ALKBH4Q9NXW9 302 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 DNAJC27Q9NZQ0 273 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 DKK4Q9UBT3 224 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 AASSQ9UDR5 926 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 HDGFL3Q9Y3E1 203 aa13.85□□□□□ -0.19
CLN6-219ENST00000637329 NPIPB13A6NJU9 1138 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 NPIPB4C9JG80 1138 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 G3V3Y1 287 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 CEACAM4O75871 244 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 WISP1O95388 367 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 TXNDC12O95881 172 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 CD14P08571 375 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 HTR1AP08908 422 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 DBTP11182 482 aaKnown RBP13.84□□□□□ -0.19
CLN6-219ENST00000637329 NOS3P29474 1203 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 ALDH3B2P48448 385 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 NUDT6P53370 316 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 RPL18Q07020 188 aaKnown RBP13.84□□□□□ -0.19
CLN6-219ENST00000637329 FOXO1Q12778 655 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 TMED1Q13445 227 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 ARMC4Q5T2S8 1044 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 AADACL4Q5VUY2 407 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 RAET1LQ5VY80 246 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 GPR139Q6DWJ6 353 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 IGFL2Q6UWQ7 119 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 LINC00696Q6ZRV3 163 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 AHSA2Q719I0 299 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 CXXC5Q7LFL8 322 aaKnown RBP13.84□□□□□ -0.19
CLN6-219ENST00000637329 SPARTQ8N0X7 666 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 LRRC75AQ8NAA5 344 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 OR2M7Q8NG81 312 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 HAS2Q92819 552 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 JSRP1Q96MG2 331 aaPredicted RBP13.84□□□□□ -0.19
CLN6-219ENST00000637329 GNRHR2Q96P88 292 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 ERMAPQ96PL5 475 aaPredicted RBP13.84□□□□□ -0.19
CLN6-219ENST00000637329 NPAS1Q99742 590 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 OR11A1Q9GZK7 315 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 ENKD1Q9H0I2 346 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 ZNF552Q9H707 407 aaPredicted RBP13.84□□□□□ -0.19
CLN6-219ENST00000637329 DEPPQ9NTK1 212 aa13.84□□□□□ -0.19
CLN6-219ENST00000637329 A6NHS1 94 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 LIPT2A6NK58 231 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 GJE1A6NN92 205 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 PTGES3LE9PB15 166 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 BLOC1S5-TXNDC5H3BN57 136 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 LINC01387J3KSC0 135 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 IGHMP01871 453 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 CDK1P06493 297 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 CD46P15529 392 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 JUNBP17275 347 aaPredicted RBP13.83□□□□□ -0.2
CLN6-219ENST00000637329 GRPRP30550 384 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 SDHAP31040 664 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 TTKP33981 857 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 AQP2P41181 271 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 ZP4Q12836 540 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 TBCEQ15813 527 aaPredicted RBP13.83□□□□□ -0.2
CLN6-219ENST00000637329 SLC6A19Q695T7 634 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 SPINK14Q6IE38 97 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 FAM122BQ7Z309 247 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 ANKK1Q8NFD2 765 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 MOSPD2Q8NHP6 518 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 C9orf43Q8TAL5 461 aaPredicted RBP13.83□□□□□ -0.2
CLN6-219ENST00000637329 SLC39A7Q92504 469 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 GGHQ92820 318 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 C5orf34Q96MH7 638 aa13.83□□□□□ -0.2
CLN6-219ENST00000637329 TUBA1CQ9BQE3 449 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms