RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 C4BP0C0L5 1744 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TRBV9A0A0B4J1U6 114 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ZC3H12DA2A288 527 aaKnown RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM202A6NGA9 273 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 CENPXA8MT69 81 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 H3BNH8 94 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 PRYO14603 147 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 PRMT5O14744 637 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TNFSF11O14788 317 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 SURF4O15260 269 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 PFDN1O60925 122 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 BCAR3O75815 825 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 UTS2O95399 124 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 JUNP05412 331 aaKnown RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 VSIG10L2P0DP72 767 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF12P17014 697 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 IDSP22304 550 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 NKX2-1P43699 371 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 GNPDA1P46926 289 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 GSSP48637 474 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 RRADP55042 308 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 DCDC1P59894 354 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 C2orf80Q0P641 193 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 KRR1Q13601 381 aaKnown RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 RESP18Q5W5W9 173 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ANKRD54Q6NXT1 300 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 FOXR1Q6PIV2 292 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ACOT1Q86TX2 421 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 NT5DC3Q86UY8 548 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 GPBP1Q86WP2 473 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 HPS6Q86YV9 775 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 SPACA3Q8IXA5 215 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 PXT1Q8NFP0 134 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 OR56A4Q8NGH8 313 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 OR9A4Q8NGU2 314 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 OR6N2Q8NGY6 317 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 WFIKKN2Q8TEU8 576 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 BAALCQ8WXS3 180 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM37Q8WXS4 190 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 RORBQ92753 470 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 CREB3L1Q96BA8 519 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 FAF2Q96CS3 445 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TCEAL4Q96EI5 215 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 LGMNQ99538 433 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 NMUR2Q9GZQ4 415 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM39BQ9GZU3 492 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 MARCH7Q9H992 704 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 L2HGDHQ9H9P8 463 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 NMUR1Q9HB89 426 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 NOX4Q9NPH5 578 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TEX10Q9NXF1 929 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 PAK5Q9P286 719 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 KLHL21Q9UJP4 597 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 NUDT5Q9UKK9 219 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 DOT1LQ8TEK3 1739 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 NID2Q14112 1375 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ADGRA2Q96PE1 1338 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 BRCA2P51587 3418 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 A0A1B0GV72 72 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 A0A1B0GVG6 124 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 EIF4E1BA6NMX2 242 aaKnown RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 E7ENX8 843 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 CASKO14936 926 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TCAPO15273 167 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 KIAA0513O60268 411 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 LATS1O95835 1130 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ANGPTL1O95841 491 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 HLA-HP01893 362 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 P04436 131 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 HCKP08631 526 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 HAPLN1P10915 354 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ITPKBP27987 946 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ELK4P28324 431 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 NBL1P41271 181 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 P2RY1P47900 373 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 HOXA1P49639 335 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 MAZP56270 477 aaKnown RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 FAM3AP98173 230 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 PNRC1Q12796 327 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 FOXL1Q12952 345 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 SRSF6Q13247 344 aaKnown RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 IRF4Q15306 451 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 RPEL1Q2QD12 228 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ACSF3Q4G176 576 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 SPIN3Q5JUX0 258 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 SDHAF4Q5VUM1 108 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM268Q5VZI3 342 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 SAXO2Q658L1 398 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 TCEAL6Q6IPX3 200 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF544Q6NX49 715 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 PNCKQ6P2M8 343 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 PAQR6Q6TCH4 344 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 BTNL3Q6UXE8 466 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 CYHR1Q6ZMK1 362 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 ACOT7LQ6ZUV0 252 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 CTU1Q7Z7A3 348 aaKnown RBP4.36□□□□□ -1.71
SDCBP-213ENST00000630925 XYLT1Q86Y38 959 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 NRMQ8IXM6 262 aa4.36□□□□□ -1.71
SDCBP-213ENST00000630925 OR6M1Q8NGM8 313 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms