RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 SUCLG1P53597 346 aaKnown RBP17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 TPD52P55327 224 aaPredicted RBP17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 CLDN20P56880 219 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 RAC1P63000 192 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 ELOA3BQ3SY89 546 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 GGNQ86UU5 652 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 ELOA3Q8NG57 546 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 DUS3LQ96G46 650 aaKnown RBP17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 ALPK1Q96QP1 1244 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 FNDC11Q9BVV2 318 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 NMNAT1Q9HAN9 279 aaPredicted RBP17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 SERINC1Q9NRX5 453 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 MAN2C1Q9NTJ4 1040 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 ZNF175Q9Y473 711 aa17.8■□□□□ 0.44
R3HCC1-210ENST00000625275 FREM1Q5H8C1 2179 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 ROS1P08922 2347 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 ZC3H12DA2A288 527 aaKnown RBP17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 SMNDC1O75940 238 aaKnown RBP eCLIP17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 RAF1P04049 648 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 THRBP10828 461 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 HOXB6P17509 224 aaKnown RBP17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 PTNP21246 168 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 SFTPDP35247 375 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 ST3GAL3Q11203 375 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 FOXD4Q12950 439 aaPredicted RBP17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 VWA1Q6PCB0 445 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 LINC00114Q6XXX2 140 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 TGIF2LYQ8IUE0 185 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 NKAIN4Q8IVV8 208 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 PIK3C3Q8NEB9 887 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 MBD6Q96DN6 1003 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 STARD4Q96DR4 205 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 ZNF347Q96SE7 839 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 ZNF426Q9BUY5 554 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 OR11A1Q9GZK7 315 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 TESMINQ9Y4I5 508 aa17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 SPIN1Q9Y657 262 aaPredicted RBP17.79■□□□□ 0.44
R3HCC1-210ENST00000625275 IGKV1D-42A0A075B6H8 117 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 ZNF208O43345 1280 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 HRGP04196 525 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 IFNA8P32881 189 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 MAP2K6P52564 334 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 RPS3AP61247 264 aaKnown RBP17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 EGR4Q05215 589 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 SYT14P1Q58G82 188 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 PRR14LQ5THK1 2151 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 FNDC9Q8TBE3 224 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 SLC25A43Q8WUT9 341 aaPredicted RBP17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 PYDC1Q8WXC3 89 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 ZNF845Q96IR2 970 aaPredicted RBP17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 MPP4Q96JB8 637 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 DHRS1Q96LJ7 313 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 TMUB1Q9BVT8 246 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 PLEKHF2Q9H8W4 249 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 RNF122Q9H9V4 155 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 NDRG3Q9UGV2 375 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 NAV3Q8IVL0 2385 aa17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 RAI1Q7Z5J4 1906 aaPredicted RBP17.78■□□□□ 0.44
R3HCC1-210ENST00000625275 H1F0P07305 194 aaKnown RBP17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 CD99P14209 185 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 RRM2P31350 389 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 KIR2DL2P43627 348 aaPredicted RBP17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 PCYT1AP49585 367 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 SIRPAP78324 504 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 SPIBQ01892 262 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 PON3Q15166 354 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 POU4F3Q15319 338 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 CTU2Q2VPK5 515 aaKnown RBP17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 TMEM176BQ3YBM2 270 aaPredicted RBP17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 BTLAQ7Z6A9 289 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 P3H2Q8IVL5 708 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 TMEM255BQ8WV15 326 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 ARL5BQ96KC2 179 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 KLHL15Q96M94 604 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 ARMC1Q9NVT9 282 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 STOML1Q9UBI4 398 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 AP4S1Q9Y587 144 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 NF1P21359 2839 aa17.77■□□□□ 0.44
R3HCC1-210ENST00000625275 A0A0J9YW62 118 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 A0A1W2PRQ8 180 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 GJE1A6NN92 205 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 A8MVM7 634 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 NPIPB7O75200 414 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 TIPRLO75663 272 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 ATE1O95260 518 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 TFPIP10646 304 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 FCGR2AP12318 317 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 CD79BP40259 229 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 DGCR6Q14129 220 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 KEAP1Q14145 624 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 TRAM2Q15035 370 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 OR2T5Q6IEZ7 315 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 OR2T29Q8NH02 315 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 OR52J3Q8NH60 311 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 DDIT4LQ96D03 193 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 DNAJA3Q96EY1 480 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 OPN3Q9H1Y3 402 aaPredicted RBP17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 ANKRD19PQ9H560 264 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 YY1AP1Q9H869 796 aa17.76■□□□□ 0.43
R3HCC1-210ENST00000625275 EIF1AYO14602 144 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms