RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 EVA1AQ9H8M9 152 aa22.15■■□□□ 1.14
VEGFA-229ENST00000621747 SELENONQ9NZV5 590 aa22.15■■□□□ 1.14
VEGFA-229ENST00000621747 TESQ9UGI8 421 aaKnown RBP22.15■■□□□ 1.14
VEGFA-229ENST00000621747 AMDHD2Q9Y303 409 aa22.15■■□□□ 1.14
VEGFA-229ENST00000621747 MAGED1Q9Y5V3 778 aaPredicted RBP22.15■■□□□ 1.14
VEGFA-229ENST00000621747 MTORP42345 2549 aa22.15■■□□□ 1.14
VEGFA-229ENST00000621747 FLNAP21333 2647 aaKnown RBP22.14■■□□□ 1.14
VEGFA-229ENST00000621747 A0A1B0GWA3 101 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 A0A1W2PR80 420 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 OR6C65A6NJZ3 312 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 FTCDNL1E5RQL4 147 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 OVOL3O00110 214 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 OR2T1O43869 369 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 TPST1O60507 370 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 KRT33AO76009 404 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 HTR2AP28223 471 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 AQP1P29972 269 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 RPS5P46782 204 aaKnown RBP22.14■■□□□ 1.13
VEGFA-229ENST00000621747 RGS8P57771 180 aaPredicted RBP22.14■■□□□ 1.13
VEGFA-229ENST00000621747 EGR4Q05215 589 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 GLIPR1L2Q4G1C9 344 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 ALG10BQ5I7T1 473 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 METTL21CQ5VZV1 264 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 CREB3L2Q70SY1 520 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 ARMC8Q8IUR7 673 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 C11orf65Q8NCR3 313 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 SLC38A4Q969I6 547 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 ANKRD27Q96NW4 1050 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 CGREF1Q99674 301 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 RSPO3Q9BXY4 272 aaPredicted RBP22.14■■□□□ 1.13
VEGFA-229ENST00000621747 SLC17A5Q9NRA2 495 aa22.14■■□□□ 1.13
VEGFA-229ENST00000621747 TRIM64A6NGJ6 449 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 TRIM64BA6NI03 449 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 CD40P25942 277 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 RBBP4Q09028 425 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 CYP51A1Q16850 503 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 PGGHGQ32M88 737 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 FAM91A1Q658Y4 838 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 ULK3Q6PHR2 472 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 COMTD1Q86VU5 262 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 DEPDC4Q8N2C3 294 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 CIARTQ8N365 385 aaPredicted RBP22.13■■□□□ 1.13
VEGFA-229ENST00000621747 KTI12Q96EK9 354 aaPredicted RBP22.13■■□□□ 1.13
VEGFA-229ENST00000621747 POM121Q96HA1 1249 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 TMEM27Q9HBJ8 222 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 POU2F3Q9UKI9 436 aa22.13■■□□□ 1.13
VEGFA-229ENST00000621747 ACANP16112 2415 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 ARID1AO14497 2285 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 M0R1B8 84 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 NFYCQ13952 458 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 FAM69AQ5T7M9 428 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 NIPAL3Q6P499 406 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 SLC22A25Q6T423 547 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 KLHL24Q6TFL4 600 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 RETREG3Q86VR2 466 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 WDR31Q8NA23 367 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 SLC47A1Q96FL8 570 aa22.12■■□□□ 1.13
VEGFA-229ENST00000621747 ROS1P08922 2347 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 ZNF587BE7ETH6 402 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 AIM2O14862 343 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 SMAD7O15105 426 aaKnown RBP22.11■■□□□ 1.13
VEGFA-229ENST00000621747 WNT11O96014 354 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 HEXAP06865 529 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 ZNF43P17038 809 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 CDKN1AP38936 164 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 SELENOPP49908 381 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 MTPNP58546 118 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 PRPS1P60891 318 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 ETFDHQ16134 617 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 NET1Q7Z628 596 aaPredicted RBP22.11■■□□□ 1.13
VEGFA-229ENST00000621747 DTX2Q86UW9 622 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 RANBP3LQ86VV4 465 aaPredicted RBP22.11■■□□□ 1.13
VEGFA-229ENST00000621747 PTOV1Q86YD1 416 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 EPHX4Q8IUS5 362 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 RNF217Q8TC41 542 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 TRAF4Q9BUZ4 470 aaPredicted RBP22.11■■□□□ 1.13
VEGFA-229ENST00000621747 GRIP2Q9C0E4 1043 aa22.11■■□□□ 1.13
VEGFA-229ENST00000621747 TRAV36DV7A0A075B6V5 113 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 FZD7O75084 574 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 MFN2O95140 757 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 CDH2P19022 906 aaPredicted RBP22.1■■□□□ 1.13
VEGFA-229ENST00000621747 PCBP3P57721 371 aaKnown RBP22.1■■□□□ 1.13
VEGFA-229ENST00000621747 LTBQ06643 244 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 AGAP6Q5VW22 663 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 Q71RC1 249 aaPredicted RBP22.1■■□□□ 1.13
VEGFA-229ENST00000621747 SLC30A8Q8IWU4 369 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 TAAR8Q969N4 342 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 BOD1Q96IK1 185 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 PRR14Q9BWN1 585 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 C1QTNF6Q9BXI9 259 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 TMEM120AQ9BXJ8 343 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 MRGBPQ9NV56 204 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 B3GALT5Q9Y2C3 310 aa22.1■■□□□ 1.13
VEGFA-229ENST00000621747 TROVE2P10155 538 aaKnown RBP eCLIP22.09■■□□□ 1.133e-17■■■□□ 18.6
VEGFA-229ENST00000621747 HOXB4P17483 251 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-229ENST00000621747 DMTNQ08495 405 aa22.09■■□□□ 1.13
VEGFA-229ENST00000621747 SPOCK1Q08629 439 aa22.09■■□□□ 1.13
VEGFA-229ENST00000621747 SELPLGQ14242 412 aa22.09■■□□□ 1.13
VEGFA-229ENST00000621747 MFSD13AQ14CX5 517 aa22.09■■□□□ 1.13
VEGFA-229ENST00000621747 OR1Q1Q15612 314 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms