RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 A0A1W2PPC4 97 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 MCRIP1C9JLW8 97 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 TPPPO94811 219 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 NXPH2O95156 264 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 IGHV3-9P01782 118 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 ALDOCP09972 364 aaKnown RBP10.53□□□□□ -0.72
CLIP1-219ENST00000620786 SLC1A3P43003 542 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 ELAVL1Q15717 326 aaKnown RBP10.53□□□□□ -0.72
CLIP1-219ENST00000620786 C9orf152Q5JTZ5 239 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 AGAP6Q5VW22 663 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 DNAJC22Q8N4W6 341 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 ZFAND1Q8TCF1 268 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 GNG12Q9UBI6 72 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 MOKQ9UQ07 419 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 NHSL1Q5SYE7 1610 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 RNF212BA8MTL3 300 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 TAPBPO15533 448 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 DOK2O60496 412 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 PRAMEF4O60810 478 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 RFPL3O75679 317 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 ACP2P11117 423 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 ITGAMP11215 1152 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 CNIH2Q6PI25 160 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLIP1-219ENST00000620786 ATP23Q9Y6H3 246 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 TARM1B6A8C7 271 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 MKRN2OSH3BPM6 223 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 OR7C1O76099 320 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-219ENST00000620786 BMXP51813 675 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 MEF2DQ14814 521 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 LINC00346Q8IVM7 164 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 B3GAT1Q9P2W7 334 aa10.53□□□□□ -0.72
CLIP1-219ENST00000620786 H7C2Y5 167 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 BET1O15155 118 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 EIF4EP06730 217 aaKnown RBP10.52□□□□□ -0.72
CLIP1-219ENST00000620786 OR8G3PP0DMU2 310 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 NPPBP16860 134 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 HTR2AP28223 471 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 RPS18P62269 152 aaKnown RBP10.52□□□□□ -0.72
CLIP1-219ENST00000620786 SPEM2Q0P670 501 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 HYAL1Q12794 435 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 HES1Q14469 280 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 GPR155Q7Z3F1 870 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 PRICKLE2Q7Z3G6 844 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 WDSUB1Q8N9V3 476 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 FNDC9Q8TBE3 224 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 WBP2Q969T9 261 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 CPPED1Q9BRF8 314 aaPredicted RBP10.52□□□□□ -0.72
CLIP1-219ENST00000620786 ALG12Q9BV10 488 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 FKRPQ9H9S5 495 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 NLKQ9UBE8 527 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF281Q9Y2X9 895 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 SC5DO75845 299 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 TUSC2O75896 110 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 IL2RAP01589 272 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 S100A7P31151 101 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 HOXA1P49639 335 aaPredicted RBP10.52□□□□□ -0.72
CLIP1-219ENST00000620786 EDDM3BP56851 147 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 GABREP78334 506 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 ZNF169Q14929 603 aaPredicted RBP10.52□□□□□ -0.72
CLIP1-219ENST00000620786 KHSRPQ92945 711 aaKnown RBP eCLIP10.52□□□□□ -0.722e-6■■■■□ 20.7
CLIP1-219ENST00000620786 FAM234AQ9H0X4 552 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 EHFQ9NZC4 300 aa10.52□□□□□ -0.72
CLIP1-219ENST00000620786 MYH9P35579 1960 aaKnown RBP10.52□□□□□ -0.73
CLIP1-219ENST00000620786 A0A1B0GWA3 101 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 LILRB5O75023 590 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 GAAP10253 952 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 TACR1P25103 407 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 ZNF92Q03936 586 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 LTBQ06643 244 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 RUNX2Q13950 521 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 DPY19L2P1Q6NXN4 242 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 ADGRG5Q8IZF4 528 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 MAFIPQ8WZ33 124 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 C8orf44Q96CB5 159 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 PRRT1Q99946 306 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 OCSTAMPQ9BR26 566 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 EGLN1Q9GZT9 426 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 A4GALTQ9NPC4 353 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 HIF1ANQ9NWT6 349 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 SLC23A2Q9UGH3 650 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 PROCRQ9UNN8 238 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 OR51B4Q9Y5P0 310 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 TK1P04183 234 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 IL3RAP26951 378 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 CYCSP99999 105 aaKnown RBP10.52□□□□□ -0.73
CLIP1-219ENST00000620786 CMIPQ8IY22 773 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 FRMD1Q8N878 549 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 FBXO27Q8NI29 283 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 NT5C3BQ969T7 300 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 MENTQ9BUN1 341 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 HRASLSQ9HDD0 168 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 NPFFR2Q9Y5X5 522 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 OR6C76A6NM76 312 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 A8MVM7 634 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 MRPS14O60783 128 aaKnown RBP10.52□□□□□ -0.73
CLIP1-219ENST00000620786 CSO75390 466 aaKnown RBP10.52□□□□□ -0.73
CLIP1-219ENST00000620786 GASTP01350 101 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 CDK1P06493 297 aa10.52□□□□□ -0.73
CLIP1-219ENST00000620786 GRPP07492 148 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms