RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 KLK11Q9UBX7 282 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CSNK2A2P19784 350 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 FBLP22087 321 aaKnown RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 DVL1P1P54792 670 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 C3orf38Q5JPI3 329 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OR52N2Q8NGI0 321 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CDS1Q92903 461 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 NIPSNAP3BQ9BS92 247 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SLC12A9Q9BXP2 914 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 BARHL1Q9BZE3 327 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PRSS21Q9Y6M0 314 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ADGRB1O14514 1584 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OR5K3A6NET4 321 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SLC2A1P11166 492 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 HOXD10P28358 340 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 BMP8BP34820 402 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PMS2P11Q13670 270 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SYT14P1Q58G82 188 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 C19orf35Q6ZS72 473 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 BMP8AQ7Z5Y6 402 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 C15orf40Q8WUR7 153 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 KCNK15Q9H427 330 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 FAM124BQ9H5Z6 455 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 NRIP3Q9NQ35 241 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PPT2Q9UMR5 302 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 RAB29O14966 203 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CXCL2P19875 107 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 POLR2LP62875 67 aaKnown RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ST3GAL3Q11203 375 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PHLDA2Q53GA4 152 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SLC35D2Q76EJ3 337 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 YAF2Q8IY57 180 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SDR9C7Q8NEX9 313 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PHOSPHO1Q8TCT1 267 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SH3RF2Q8TEC5 729 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 MITD1Q8WV92 249 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 RYDENQ9NUL5 291 aaKnown RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SRMP19623 302 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 GABRR1P24046 479 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CDK3Q00526 305 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OR52A5Q9H2C5 316 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CNOT2Q9NZN8 540 aaKnown RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CA14Q9ULX7 337 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 LAMP3Q9UQV4 416 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PLEKHM1Q9Y4G2 1056 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 A0A1W2PR80 420 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 AQP7P3A6NL99 342 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SRPX2O60687 465 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 EDN1P05305 212 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ID4P47928 161 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PSEN2P49810 448 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 GUCA2AQ02747 115 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OR6K3Q8NGY3 331 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 HRASLS5Q96KN8 279 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OSGIN2Q9Y236 505 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 URB1O60287 2271 aaKnown RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 IGKV6D-41A0A0C4DH26 115 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ASPDHA6ND91 283 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 PRAF2O60831 178 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 NFATC2Q13469 925 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 PRR18Q8N4B5 295 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM156Q8N614 296 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 NWD1Q149M9 1564 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 PDE4DIPQ5VU43 2346 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 FITM1A5D6W6 292 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 B3GALT2O43825 422 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 HSD11B1P28845 292 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 NUP54Q7Z3B4 507 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ASPGQ86U10 573 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CXCL16Q9H2A7 254 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 LMTK3Q96Q04 1460 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ICE1Q9Y2F5 2266 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 PLA2G10O15496 165 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CTNSO60931 367 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CBR3O75828 277 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 LRG1P02750 347 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TRAPPC2P0DI81 140 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TRAPPC2BP0DI82 140 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 TIA1P31483 386 aaKnown RBP eCLIP4.68□□□□□ -1.669e-7■■■□□ 17.7
VPS13D-214ENST00000620676 ZNF41P51814 821 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF763Q0D2J5 394 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF124Q15973 351 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SLC22A6Q4U2R8 563 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 RTL6Q6ICC9 239 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 GDPGP1Q6ZNW5 385 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 FJX1Q86VR8 437 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 FAM58AQ8N1B3 248 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SLC38A5Q8WUX1 472 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SLC41A2Q96JW4 573 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 MTMR11A4FU01 709 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 LINC01387J3KSC0 135 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 DHPSP49366 369 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-214ENST00000620676 CTSCP53634 463 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR56A1Q8NGH5 318 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 OR5AR1Q8NGP9 310 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 DPF1Q92782 380 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 SCAMP4Q969E2 229 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 WWTR1Q9GZV5 400 aa4.68□□□□□ -1.66
VPS13D-214ENST00000620676 MAGT1Q9H0U3 335 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms