RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 LAMA5O15230 3695 aa7.21□□□□□ -1.26
CPNE3-209ENST00000620393 LOC400499M0QZD8 3231 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CFAP47Q6ZTR5 3102 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 TRAV27A0A087WT01 109 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 ZAR1LA6NP61 321 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 NPIPA5E9PKD4 350 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 MS4A18H0YCH9 400 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 BLOC1S5-TXNDC5H3BN57 136 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 H3BN98 237 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 SULT2B1O00204 365 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 PLPP3O14495 311 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 DENRO43583 198 aaKnown RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 DNPH1O43598 174 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 WISP2O76076 250 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 NDUFB2O95178 105 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 OR6A2O95222 327 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CPN1P15169 458 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF708P17019 499 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CAPGP40121 348 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 AQP2P41181 271 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 DIO1P49895 249 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 AGFG1P52594 562 aaKnown RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CLDN18P56856 261 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CLDN20P56880 219 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CARD18P57730 90 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 FXYD6P3P58550 94 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 RAC3P60763 192 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 PRPS1P60891 318 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 RPS4XP62701 263 aaKnown RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CSNK2A1P68400 391 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 H3F3AP84243 136 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CDK5Q00535 292 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 ZP4Q12836 540 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 PMS2P3Q13401 168 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 GINS1Q14691 196 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 PTGES3Q15185 160 aaKnown RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 TAF11Q15544 211 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 SGCBQ16585 318 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF239Q16600 458 aaKnown RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CTU2Q2VPK5 515 aaKnown RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 MS4A18Q3C1V0 323 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 KRTCAP3Q53RY4 240 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 PDSS1Q5T2R2 415 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 C6orf52Q5T4I8 152 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 RPL13AP3Q6NVV1 102 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 SMARCD3Q6STE5 483 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 DPY19L2P2Q6ZN68 376 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 ZNF620Q6ZNG0 422 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 Q6ZPB1 254 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 H1FNTQ75WM6 255 aaPredicted RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 GGNQ86UU5 652 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 Q8NA96 180 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 OR5J2Q8NH18 312 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 OR2V1Q8NHB1 315 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 CYGBQ8WWM9 190 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 SMPDL3BQ92485 455 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 DNAJA3Q96EY1 480 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 WBP1Q96G27 269 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 ADGRG7Q96K78 797 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 HRASLS5Q96KN8 279 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 SAMD8Q96LT4 415 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 TSSK6Q9BXA6 273 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 ASPNQ9BXN1 380 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 OR52D1Q9H346 318 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 EGLN3Q9H6Z9 239 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 EXO5Q9H790 373 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 MCCC2Q9HCC0 563 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 ALKBH4Q9NXW9 302 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 TAS2R5Q9NYW4 299 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 NDRG4Q9ULP0 352 aaKnown RBP7.2□□□□□ -1.26
CPNE3-209ENST00000620393 NPIPA1Q9UND3 350 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 B3GALT5Q9Y2C3 310 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 HIF3AQ9Y2N7 669 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 LIPGQ9Y5X9 500 aa7.2□□□□□ -1.26
CPNE3-209ENST00000620393 PCNX3Q9H6A9 2034 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 LOC102725191A0A1B0GVB3 256 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 H0YC42 278 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 M0R082 166 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 ERVH48-1M5A8F1 160 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 AQP7O14520 342 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 EIF1AYO14602 144 aaKnown RBP7.19□□□□□ -1.26
CPNE3-209ENST00000620393 TNFSF11O14788 317 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 SEC14L5O43304 696 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 EIF1BO60739 113 aaKnown RBP7.19□□□□□ -1.26
CPNE3-209ENST00000620393 AKR7A3O95154 331 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 SOX14O95416 240 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 F12P00748 615 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-209ENST00000620393 HMGN1P05114 100 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 ADORA3P0DMS8 318 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 SNRPBP14678 240 aaKnown RBP7.19□□□□□ -1.26
CPNE3-209ENST00000620393 GTF2E2P29084 291 aaKnown RBP7.19□□□□□ -1.26
CPNE3-209ENST00000620393 SLC6A6P31641 620 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 UQCRC1P31930 480 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 RPS6KA3P51812 740 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 SMSP52788 366 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 TPD52P55327 224 aaPredicted RBP7.19□□□□□ -1.26
CPNE3-209ENST00000620393 RPS3AP61247 264 aaKnown RBP7.19□□□□□ -1.26
CPNE3-209ENST00000620393 RPL18Q07020 188 aaKnown RBP7.19□□□□□ -1.26
CPNE3-209ENST00000620393 C19orf57Q0VDD7 668 aa7.19□□□□□ -1.26
CPNE3-209ENST00000620393 KLRB1Q12918 225 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms