RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 SFXN3Q9BWM7 321 aa6.64□□□□□ -1.35
CBWD1-228ENST00000619157 LAT2Q9GZY6 243 aa6.64□□□□□ -1.35
CBWD1-228ENST00000619157 OPN3Q9H1Y3 402 aaPredicted RBP6.64□□□□□ -1.35
CBWD1-228ENST00000619157 TPT1P8Q9HAU6 139 aa6.64□□□□□ -1.35
CBWD1-228ENST00000619157 EXD2Q9NVH0 621 aa6.64□□□□□ -1.35
CBWD1-228ENST00000619157 CLEC4AQ9UMR7 237 aa6.64□□□□□ -1.35
CBWD1-228ENST00000619157 ZNF175Q9Y473 711 aa6.64□□□□□ -1.35
CBWD1-228ENST00000619157 HIVEP1P15822 2718 aa6.64□□□□□ -1.35
CBWD1-228ENST00000619157 HEATR5AQ86XA9 2040 aa6.64□□□□□ -1.35
CBWD1-228ENST00000619157 ANKRD17O75179 2603 aaKnown RBP6.63□□□□□ -1.35
CBWD1-228ENST00000619157 MAP1AP78559 2803 aaPredicted RBP6.63□□□□□ -1.35
CBWD1-228ENST00000619157 AGAP5A6NIR3 686 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 EEF1E1-BLOC1S5C9J1V9 151 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 NR5A2O00482 541 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 EEF1E1O43324 174 aaKnown RBP6.63□□□□□ -1.35
CBWD1-228ENST00000619157 SS18L1O75177 396 aaPredicted RBP6.63□□□□□ -1.35
CBWD1-228ENST00000619157 SOX30O94993 753 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 AGR2O95994 175 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 CSTAP01040 98 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 EDNRAP25101 427 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 CD40P25942 277 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 ELK4P28324 431 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 UQCRC1P31930 480 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 SFTPDP35247 375 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 ATP4BP51164 291 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 CCR4P51679 360 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 ZNF41P51814 821 aaPredicted RBP6.63□□□□□ -1.35
CBWD1-228ENST00000619157 SUMO3P55854 103 aaPredicted RBP6.63□□□□□ -1.35
CBWD1-228ENST00000619157 SESN3P58005 492 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 SIRPAP78324 504 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 MXRA7P84157 204 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 FAM27E3Q08E93 113 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 AKAP6Q13023 2319 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 RGNQ15493 299 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 ZNF239Q16600 458 aaKnown RBP6.63□□□□□ -1.35
CBWD1-228ENST00000619157 GPAT3Q53EU6 434 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 DLEU7Q6UYE1 221 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 ESPNLQ6ZVH7 1005 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 VRK2Q86Y07 508 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 LINC01560Q8TB33 94 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 SLC38A5Q8WUX1 472 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 DYDC1Q8WWB3 177 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 STON2Q8WXE9 905 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 MAL2Q969L2 176 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 SPDL1Q96EA4 605 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 TMEM19Q96HH6 336 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 ITCHQ96J02 903 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 KLHL15Q96M94 604 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 ZFP3Q96NJ6 502 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 TRNT1Q96Q11 434 aaKnown RBP6.63□□□□□ -1.35
CBWD1-228ENST00000619157 ZBTB18Q99592 522 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 CCDC106Q9BWC9 280 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 MCCC2Q9HCC0 563 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 POLE3Q9NRF9 147 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 RLIMQ9NVW2 624 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 CCDC167Q9P0B6 97 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 VAPAQ9P0L0 249 aa6.63□□□□□ -1.35
CBWD1-228ENST00000619157 A0A096LPI6 279 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 IGHV3-15A0A0B4J1V0 119 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 ZNF814B7Z6K7 855 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 GTPBP1O00178 669 aaKnown RBP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 CTAG2O75638 210 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 KRT75O95678 551 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 NUDT14O95848 222 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 BCHEP06276 602 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 CRHP06850 196 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 PRG2P13727 222 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 ENPP1P22413 925 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 SSTR2P30874 369 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 EIF1P41567 113 aaKnown RBP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 ACAA2P42765 397 aaKnown RBP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 CRATP43155 626 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 ZNF81P51508 661 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 DSTNP60981 165 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 EEF1A1P68104 462 aaKnown RBP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 KCNJ10P78508 379 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 LRRC74AQ0VAA2 488 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 SF3A3Q12874 501 aaKnown RBP eCLIP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 SELPLGQ14242 412 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 SF3B4Q15427 424 aaKnown RBP eCLIP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 ADRM1Q16186 407 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 TMEM176BQ3YBM2 270 aaPredicted RBP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 AGKQ53H12 422 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 C6orf10Q5SRN2 563 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 MRPL2Q5T653 305 aaKnown RBP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 ATAD3BQ5T9A4 648 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 HBMQ6B0K9 141 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 ZNF836Q6ZNA1 936 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 PLEKHM3Q6ZWE6 761 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 EIF3MQ7L2H7 374 aaKnown RBP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 NUFIP2Q7Z417 695 aaKnown RBP6.62□□□□□ -1.35
CBWD1-228ENST00000619157 P4HA3Q7Z4N8 544 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 LURAP1LQ8IV03 231 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 CLIP4Q8N3C7 705 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 TMCO5AQ8N6Q1 288 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 TRIML2Q8N7C3 387 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 CNEP1R1Q8N9A8 125 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 ZNF610Q8N9Z0 462 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 ATP6V1C2Q8NEY4 427 aa6.62□□□□□ -1.35
CBWD1-228ENST00000619157 TOR1AIP2Q8NFQ8 470 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms