RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 KISS1RQ969F8 398 aaPredicted RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 JSRP1Q96MG2 331 aaPredicted RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 MND1Q9BWT6 205 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 DCSTAMPQ9H295 470 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 TMEM9BQ9NQ34 198 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 RPRD1BQ9NQG5 326 aaKnown RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 CHRNA9Q9UGM1 479 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 RPH3AQ9Y2J0 694 aaPredicted RBP7.07□□□□□ -1.28
NEK3-207ENST00000617054 ZNF337Q9Y3M9 751 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 PCDHGA5Q9Y5G8 931 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 CORINQ9Y5Q5 1042 aa7.07□□□□□ -1.28
NEK3-207ENST00000617054 GVINP1Q7Z2Y8 2422 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 DSPP15924 2871 aaKnown RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 TMED7-TICAM2A0A0A6YYA0 188 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 TRIM64BA6NI03 449 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 CCRL2O00421 344 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 SLC25A12O75746 678 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 GP1BBP13224 206 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 HLA-DOBP13765 273 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 PGCP20142 388 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 PYCR1P32322 319 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 RPL18Q07020 188 aaKnown RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 MADCAM1Q13477 382 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 GLYR1Q49A26 553 aaPredicted RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 ALG10Q5BKT4 473 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 SLC6A19Q695T7 634 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 ZNF517Q6ZMY9 492 aaPredicted RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 MDGA2Q7Z553 956 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 ZNF440Q8IYI8 595 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 OR2Y1Q8NGV0 311 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 ELP5Q8TE02 316 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 CT55Q8WUE5 264 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 FCGR1BQ92637 280 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 RFKQ969G6 155 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 ZNF649Q9BS31 505 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 TMED9Q9BVK6 235 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 PRRG3Q9BZD7 231 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 CHCHD3Q9NX63 227 aaKnown RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 TAS2R10Q9NYW0 307 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 C19orf25Q9UFG5 118 aaPredicted RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 TMED7Q9Y3B3 224 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 E9PI62 339 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 MRPS14O60783 128 aaKnown RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 SCG5P05408 212 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 PNMTP11086 282 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 ZNF3P17036 446 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 HK1P19367 917 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 CELP19835 753 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 OPRL1P41146 370 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 FOLR3P41439 243 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 SERPINB10P48595 397 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 BMXP51813 675 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 RPS25P62851 125 aaKnown RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.06□□□□□ -1.28
NEK3-207ENST00000617054 LEG1Q6P5S2 330 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 ZNF367Q7RTV3 350 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 PHC2Q8IXK0 858 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 ALDH16A1Q8IZ83 802 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 SLC15A4Q8N697 577 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 ZNF511Q8NB15 262 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 SYT14Q8NB59 555 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 PROKR2Q8NFJ6 384 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 OR5L2Q8NGL0 311 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 NUBPLQ8TB37 319 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 DYNC2LI1Q8TCX1 351 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 HGDQ93099 445 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 TMCO6Q96DC7 493 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 GNRHR2Q96P88 292 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 TIMP4Q99727 224 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 HDHD5Q9BXW7 423 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 EXOSC3Q9NQT5 275 aaKnown RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 ERVK13-1Q9NX77 482 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 AKAP7Q9P0M2 348 aaPredicted RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 TCFL5Q9UL49 500 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 SLC6A5Q9Y345 797 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 DOCK10Q96BY6 2186 aa7.06□□□□□ -1.28
NEK3-207ENST00000617054 COL5A1P20908 1838 aaPredicted RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 COL27A1Q8IZC6 1860 aaPredicted RBP7.06□□□□□ -1.28
NEK3-207ENST00000617054 NSG1A0A0A6YYJ2 146 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 SPAARA0A1B0GVQ0 90 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CCDC182A6NF36 153 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 EFNA2O43921 213 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 TSPAN19P0C672 248 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 ZNF883P0CG24 379 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CCKBRP32239 447 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CASP3P42574 277 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 CAV3P56539 151 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 WNT4P56705 351 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 Q0VFX4 171 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 HES3Q5TGS1 186 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 C22orf42Q6IC83 251 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 ADCK1Q86TW2 530 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 NPEPL1Q8NDH3 523 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 C17orf47Q8NEP4 570 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 C1GALT1C1Q96EU7 318 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 LOXL4Q96JB6 756 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 IMMP1LQ96LU5 166 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 KCNS3Q9BQ31 491 aa7.05□□□□□ -1.28
NEK3-207ENST00000617054 C6orf62Q9GZU0 229 aaPredicted RBP7.05□□□□□ -1.28
NEK3-207ENST00000617054 WDR54Q9H977 334 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms