RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PBX2P40425 430 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 FRKP42685 505 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 LTBQ06643 244 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 DUSP8Q13202 625 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 SRSF5Q13243 272 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 NFATC4Q14934 902 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 OPCMLQ14982 345 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 CDNFQ49AH0 187 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 ARHGAP40Q5TG30 622 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 PRAMEF8Q5VWM4 474 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 PRAMEF7Q5VXH5 474 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 CMTM4Q8IZR5 234 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 NAXEQ8NCW5 288 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 OR51D1Q8NGF3 324 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 DUSP19Q8WTR2 217 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 FAM46BQ96A09 425 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 ARHGDIGQ99819 225 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC6A7Q99884 636 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 TPSD1Q9BZJ3 242 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 ENKD1Q9H0I2 346 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC6A15Q9H2J7 730 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 LRIT1Q9P2V4 623 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 COPS3Q9UNS2 423 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 CAMK2AQ9UQM7 478 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 PIAS3Q9Y6X2 628 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 CIB4A0PJX0 185 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 F5H0A9 414 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 CHP2O43745 196 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 CTSVO60911 334 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 SEMA4FO95754 770 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 OPN1LWP04000 364 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 DRD3P35462 400 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 OR1D4P47884 311 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 NR0B1P51843 470 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 ADPRHP54922 357 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 PRPS1P60891 318 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 BTG1P62324 171 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 RAB11BQ15907 218 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 ALG11Q2TAA5 492 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 GLT8D1Q68CQ7 371 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 PARM1Q6UWI2 310 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 TCTE3Q8IZS6 198 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 INO80EQ8NBZ0 244 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 OR4D9Q8NGE8 314 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM41AQ96HV5 264 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 NRSN2Q9GZP1 204 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 MFFQ9GZY8 342 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 SYT4Q9H2B2 425 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 LHX9Q9NQ69 397 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 FBXL2Q9UKC9 423 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 SIRT4Q9Y6E7 314 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM14AQ9Y6G1 99 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 METTL21EPA6NDL7 271 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 EEF1E1-BLOC1S5C9J1V9 151 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 NPIPA5E9PKD4 350 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 P2RX6O15547 441 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC16A7O60669 478 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 P2RX3P56373 397 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 PLCXD2Q0VAA5 305 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 HTR4Q13639 388 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 PXDC1Q5TGL8 231 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 LIPNQ5VXI9 398 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 RAB12Q6IQ22 244 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 KCTD18Q6PI47 426 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 CD300LDQ6UXZ3 194 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 GPAT4Q86UL3 456 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 MAP6Q96JE9 813 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 TEX101Q9BY14 249 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 CCDC86Q9H6F5 360 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 DUSP22Q9NRW4 184 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 EVA1BQ9NVM1 165 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 NPIPA1Q9UND3 350 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 MRPS2Q9Y399 296 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF337Q9Y3M9 751 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 SCN2AQ99250 2005 aa6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 RP1L1Q8IWN7 2480 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-206ENST00000610556 A0A1W2PPL8 197 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 RGS13O14921 159 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 LILRB3O75022 631 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 RAB3DO95716 219 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 EGFP01133 1207 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 RAD52P43351 418 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 EMDP50402 254 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SPOCK1Q08629 439 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 FGL2Q14314 439 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 NSDHLQ15738 373 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 YIF1BQ5BJH7 314 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 UBE2NLQ5JXB2 153 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 FAM69AQ5T7M9 428 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 CD276Q5ZPR3 534 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 TMEM91Q6ZNR0 172 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC29A4Q7RTT9 530 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 VN1R4Q7Z5H5 301 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 PEG10Q86TG7 708 aaKnown RBP6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 CD163Q86VB7 1156 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 ZNF584Q8IVC4 421 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SLC35F3Q8IY50 421 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 SPERTQ8NA61 448 aa6.31□□□□□ -1.4
SYNPO2-206ENST00000610556 THAP6Q8TBB0 222 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms