RNA–Protein interactions for RNA: ENST00000607866.1

ITM2B-204, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-204ENST00000607866 Q6ZSR9 355 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 MTERF4Q7Z6M4 381 aaKnown RBP5.3□□□□□ -1.56
ITM2B-204ENST00000607866 CPLX4Q7Z7G2 160 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 TDRPQ86YL5 185 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 SLC15A3Q8IY34 581 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 GABRG1Q8N1C3 465 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 COX18Q8N8Q8 333 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 OR2T11Q8NH01 316 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 CLHC1Q8NHS4 586 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 B4GALNT2Q8NHY0 566 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 ABHD3Q8WU67 409 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 HSD17B8Q92506 261 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 AKAP1Q92667 903 aaKnown RBP eCLIP5.3□□□□□ -1.56
ITM2B-204ENST00000607866 OSTF1Q92882 214 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 S100PBPQ96BU1 408 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 MTERF3Q96E29 417 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 FAM120BQ96EK7 910 aaKnown RBP5.3□□□□□ -1.56
ITM2B-204ENST00000607866 C16orf58Q96GQ5 468 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 SH3YL1Q96HL8 342 aaPredicted RBP5.3□□□□□ -1.56
ITM2B-204ENST00000607866 TSSK3Q96PN8 268 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 STACQ99469 402 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 NPAS1Q99742 590 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 TRMOQ9BU70 441 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 HOXD1Q9GZZ0 328 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 C12orf65Q9H3J6 166 aaKnown RBP5.3□□□□□ -1.56
ITM2B-204ENST00000607866 TUBB1Q9H4B7 451 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 ESRP2Q9H6T0 727 aaKnown RBP5.3□□□□□ -1.56
ITM2B-204ENST00000607866 NGBQ9NPG2 151 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 SH3BP4Q9P0V3 963 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 KLHL13Q9P2N7 655 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 BAIAP2L1Q9UHR4 511 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 LAMP3Q9UQV4 416 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 RNF115Q9Y4L5 304 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 DNAJC15Q9Y5T4 150 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 MAGED1Q9Y5V3 778 aaPredicted RBP5.3□□□□□ -1.56
ITM2B-204ENST00000607866 CR1P17927 2039 aa5.3□□□□□ -1.56
ITM2B-204ENST00000607866 hCG_1807616A0A1W2PRN6 198 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 ZAR1LA6NP61 321 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 TMEM114B3SHH9 223 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 H3BNH8 94 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 OVOL3O00110 214 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 COPEO14579 308 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 ZNF195O14628 629 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 SCAMP2O15127 329 aaKnown RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 CRLF1O75462 422 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 NUDT14O95848 222 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 HMGN2P05204 90 aaKnown RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 CLEC3BP05452 202 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 YES1P07947 543 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 KRT16P08779 473 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 LINC00032P0C843 101 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 UBL4AP11441 157 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 BCKDHAP12694 445 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 KRT4P19013 534 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 ATP6V1C1P21283 382 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 IL32P24001 234 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 SHC1P29353 583 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 PPIFP30405 207 aaKnown RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 PRKAR1BP31321 381 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 SFTPDP35247 375 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 RPL3P39023 403 aaKnown RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 RAC3P60763 192 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 FOXF1Q12946 379 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 TNK1Q13470 666 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 CAPRIN1Q14444 709 aaKnown RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 LASP1Q14847 261 aaKnown RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 TAB1Q15750 504 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 TMEM176BQ3YBM2 270 aaPredicted RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 KLHL26Q53HC5 615 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 NCMAPQ5T1S8 102 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 CCNJQ5T5M9 372 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 SLC22A25Q6T423 547 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 CBLN3Q6UW01 205 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 RINLQ6ZS11 566 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 Q6ZT83 130 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 FCRLAQ7L513 359 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 SSX8Q7RTT4 187 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 C10orf107Q8IVU9 208 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 TUSC5Q8IXB3 177 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 SLC43A2Q8N370 569 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 CEP112Q8N8E3 955 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 BANPQ8N9N5 519 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 EIF1ADQ8N9N8 165 aaKnown RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 CCDC63Q8NA47 563 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 OR56A1Q8NGH5 318 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 SPATA3Q8NHX4 192 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 PSMA8Q8TAA3 256 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 RAB3IL1Q8TBN0 382 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 ZFP90Q8TF47 636 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 ROBO4Q8WZ75 1007 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 ST8SIA2Q92186 375 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 CDS1Q92903 461 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 TRMT61AQ96FX7 289 aaKnown RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 CHMP6Q96FZ7 201 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 KLHDC3Q9BQ90 382 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 SRXN1Q9BYN0 137 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 POTEKPQ9BYX7 375 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 PIGUQ9H490 435 aa5.29□□□□□ -1.56
ITM2B-204ENST00000607866 SIRT3Q9NTG7 399 aaPredicted RBP5.29□□□□□ -1.56
ITM2B-204ENST00000607866 ZCCHC3Q9NUD5 404 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms