RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 SLC30A8Q8IWU4 369 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 C10orf111Q8N326 155 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 DPP10Q8N608 796 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 SMYD1Q8NB12 490 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 ZNF385AQ96PM9 386 aaKnown RBP16.91■□□□□ 0.3
CTSA-217ENST00000607482 EPYCQ99645 322 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 SH3GL1Q99961 368 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 EVA1AQ9H8M9 152 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 C12orf10Q9HB07 376 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 MAGED1Q9Y5V3 778 aaPredicted RBP16.91■□□□□ 0.3
CTSA-217ENST00000607482 GMEB1Q9Y692 573 aa16.91■□□□□ 0.3
CTSA-217ENST00000607482 TRBV5-3A0A0A0MS03 114 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 FAM171A2A8MVW0 826 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 TMEM229AB2RXF0 380 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 SMAD7O15105 426 aaKnown RBP16.9■□□□□ 0.3
CTSA-217ENST00000607482 TPST1O60507 370 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 WNT11O96014 354 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 PTAFRP25105 342 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 PRPS1P60891 318 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 GABRA6Q16445 453 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 INTS11Q5TA45 600 aaKnown RBP16.9■□□□□ 0.3
CTSA-217ENST00000607482 NIPAL3Q6P499 406 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 CREB3L2Q70SY1 520 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 NET1Q7Z628 596 aaPredicted RBP16.9■□□□□ 0.3
CTSA-217ENST00000607482 LSMEM1Q8N8F7 131 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 C1orf162Q8NEQ5 155 aaPredicted RBP16.9■□□□□ 0.3
CTSA-217ENST00000607482 NEUROG1Q92886 237 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 KTI12Q96EK9 354 aaPredicted RBP16.9■□□□□ 0.3
CTSA-217ENST00000607482 MUS81Q96NY9 551 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 AMDHD2Q9Y303 409 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 ROS1P08922 2347 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 MTORP42345 2549 aa16.9■□□□□ 0.3
CTSA-217ENST00000607482 TRAV36DV7A0A075B6V5 113 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 AIM2O14862 343 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 ITGA5P08648 1049 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 CBLP22681 906 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 MAPRE2Q15555 327 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 ADRM1Q16186 407 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 GLIPR1L2Q4G1C9 344 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 FAM69AQ5T7M9 428 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 FAM91A1Q658Y4 838 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 HMBOX1Q6NT76 420 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 C17orf78Q8N4C9 275 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 KCNS3Q9BQ31 491 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 ECSITQ9BQ95 431 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 PRR14Q9BWN1 585 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 ASPNQ9BXN1 380 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 GSX1Q9H4S2 264 aaPredicted RBP16.89■□□□□ 0.29
CTSA-217ENST00000607482 FGFR1OP2Q9NVK5 253 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 SLC25A15Q9Y619 301 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 ARID1AO14497 2285 aa16.89■□□□□ 0.29
CTSA-217ENST00000607482 C2CD3Q4AC94 2353 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 H7C1Q1 480 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 AKAP8O43823 692 aaKnown RBP16.88■□□□□ 0.29
CTSA-217ENST00000607482 NPIPB7O75200 414 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 HTR2AP28223 471 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 CLDN17P56750 224 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 UBE2NP61088 152 aaKnown RBP16.88■□□□□ 0.29
CTSA-217ENST00000607482 MFSD13AQ14CX5 517 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 OR1Q1Q15612 314 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 AGAP6Q5VW22 663 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 CLEC9AQ6UXN8 241 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 PATL1Q86TB9 770 aaKnown RBP16.88■□□□□ 0.29
CTSA-217ENST00000607482 RETREG3Q86VR2 466 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 KDM8Q8N371 416 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 ZIC4Q8N9L1 334 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 OR10A6Q8NH74 314 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 LILRB1Q8NHL6 650 aaPredicted RBP16.88■□□□□ 0.29
CTSA-217ENST00000607482 TAAR8Q969N4 342 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 OXGR1Q96P68 337 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 ZNF385DQ9H6B1 395 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 FKRPQ9H9S5 495 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 DLL4Q9NR61 685 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 NPAP1Q9NZP6 1156 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 B3GALT5Q9Y2C3 310 aa16.88■□□□□ 0.29
CTSA-217ENST00000607482 SETD2Q9BYW2 2564 aaPredicted RBP16.88■□□□□ 0.29
CTSA-217ENST00000607482 FLNAP21333 2647 aaKnown RBP16.88■□□□□ 0.29
CTSA-217ENST00000607482 M0QX08 132 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 SLC43A1O75387 559 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 MFN2O95140 757 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 OPN1SWP03999 348 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 CD40P25942 277 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 SELENOPP49908 381 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 FOXG1P55316 489 aaPredicted RBP16.87■□□□□ 0.29
CTSA-217ENST00000607482 DMTNQ08495 405 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 TRMT5Q32P41 509 aaKnown RBP16.87■□□□□ 0.29
CTSA-217ENST00000607482 C6orf89Q6UWU4 347 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 H1FNTQ75WM6 255 aaPredicted RBP16.87■□□□□ 0.29
CTSA-217ENST00000607482 KRTAP1-3Q8IUG1 177 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 FBXL14Q8N1E6 418 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 GPR137CQ8N3F9 429 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 VANGL1Q8TAA9 524 aaPredicted RBP16.87■□□□□ 0.29
CTSA-217ENST00000607482 HS6ST2Q96MM7 605 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 MCHR1Q99705 422 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 SLC17A5Q9NRA2 495 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 ZNF701Q9NV72 531 aaPredicted RBP16.87■□□□□ 0.29
CTSA-217ENST00000607482 ATP23Q9Y6H3 246 aa16.87■□□□□ 0.29
CTSA-217ENST00000607482 ACANP16112 2415 aa16.86■□□□□ 0.29
CTSA-217ENST00000607482 TRIM64A6NGJ6 449 aa16.86■□□□□ 0.29
CTSA-217ENST00000607482 TRIM64BA6NI03 449 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms