RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ARL8BQ9NVJ2 186 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 C6orf203Q9P0P8 240 aaPredicted RBP13.91□□□□□ -0.18
RPS28-203ENST00000600659 MALT1Q9UDY8 824 aa13.91□□□□□ -0.18
RPS28-203ENST00000600659 PRRC2AP48634 2157 aaKnown RBP13.91□□□□□ -0.18
RPS28-203ENST00000600659 TRAV36DV7A0A075B6V5 113 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 LRRN3E7EW58 273 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 KLF4O43474 513 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 CNOT4O95628 575 aaKnown RBP13.9□□□□□ -0.18
RPS28-203ENST00000600659 IGHV3-9P01782 118 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 FUT4P22083 530 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 POU4F3Q15319 338 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 LRRC23Q53EV4 343 aaPredicted RBP13.9□□□□□ -0.18
RPS28-203ENST00000600659 CYBRD1Q53TN4 286 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 C5orf46Q6UWT4 87 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 ANKS4BQ8N8V4 417 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 SLC26A7Q8TE54 656 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 MOGAT1Q96PD6 335 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 TMEM43Q9BTV4 400 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 ALG2Q9H553 416 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 SLC9A8Q9Y2E8 581 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 AP3M1Q9Y2T2 418 aa13.9□□□□□ -0.18
RPS28-203ENST00000600659 M0R082 166 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 LYZL6O75951 148 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 ITGA5P08648 1049 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 PPP3CBP16298 524 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 GRPRP30550 384 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 OR1E2P47887 323 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 ITGADQ13349 1161 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 P2RY6Q15077 328 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 TSPO2Q5TGU0 170 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 FBXW9Q5XUX1 488 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 NHLRC1Q6VVB1 395 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 CREB3L2Q70SY1 520 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 CDH24Q86UP0 819 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 KDM8Q8N371 416 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 OR6S1Q8NH40 331 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 ZNF417Q8TAU3 575 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 APH1AQ96BI3 265 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 SLC25A36Q96CQ1 311 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 ZC3HAV1LQ96H79 300 aaKnown RBP13.9□□□□□ -0.19
RPS28-203ENST00000600659 ZNF587Q96SQ5 575 aaPredicted RBP13.9□□□□□ -0.19
RPS28-203ENST00000600659 SLC7A10Q9NS82 523 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 BAG5Q9UL15 447 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 SLC7A7Q9UM01 511 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 RASD1Q9Y272 281 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 SH3GLB1Q9Y371 365 aa13.9□□□□□ -0.19
RPS28-203ENST00000600659 VPS13CQ709C8 3753 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 TRAPPC13A5PLN9 417 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 CXCR6O00574 342 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 OR2T1O43869 369 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 MRPL33O75394 65 aaKnown RBP13.89□□□□□ -0.19
RPS28-203ENST00000600659 VAMP5O95183 116 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 FAM107AO95990 144 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 HPRP00739 348 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 CBLP22681 906 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 DNAJA1P31689 397 aaKnown RBP13.89□□□□□ -0.19
RPS28-203ENST00000600659 SELENOWP63302 87 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 TAB1Q15750 504 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 FXNQ16595 210 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 CASP12Q6UXS9 341 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 BHLHA15Q7RTS1 189 aaPredicted RBP13.89□□□□□ -0.19
RPS28-203ENST00000600659 TSEN54Q7Z6J9 526 aaKnown RBP13.89□□□□□ -0.19
RPS28-203ENST00000600659 VTCN1Q7Z7D3 282 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 WDFY1Q8IWB7 410 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 ZNF100Q8IYN0 542 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 FITM2Q8N6M3 262 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 ZNF433Q8N7K0 673 aaPredicted RBP13.89□□□□□ -0.19
RPS28-203ENST00000600659 ADPRHL1Q8NDY3 354 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 STEAP2Q8NFT2 490 aa13.89□□□□□ -0.19
RPS28-203ENST00000600659 MEPEQ9NQ76 525 aaPredicted RBP13.89□□□□□ -0.19
RPS28-203ENST00000600659 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.88□□□□□ -0.19
RPS28-203ENST00000600659 MS4A18H0YCH9 400 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 TRAF3IP2O43734 574 aaPredicted RBP13.88□□□□□ -0.19
RPS28-203ENST00000600659 ZNF432O94892 652 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 SELENOPP49908 381 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 LGALS3BPQ08380 585 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 MS4A18Q3C1V0 323 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 CBLL1Q75N03 491 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 LINGO2Q7L985 606 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 GPAT4Q86UL3 456 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 NKAIN4Q8IVV8 208 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 PROX1Q92786 737 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 KISS1RQ969F8 398 aaPredicted RBP13.88□□□□□ -0.19
RPS28-203ENST00000600659 LRRC37BQ96QE4 947 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 HDHD5Q9BXW7 423 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 AMBRA1Q9C0C7 1298 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 SPAG4Q9NPE6 437 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 FANCFQ9NPI8 374 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 ZNF226Q9NYT6 803 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 TAGLN3Q9UI15 199 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 A4GNTQ9UNA3 340 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 SNX13Q9Y5W8 968 aa13.88□□□□□ -0.19
RPS28-203ENST00000600659 DSCAMO60469 2012 aa13.87□□□□□ -0.19
RPS28-203ENST00000600659 PLCE1Q9P212 2302 aa13.87□□□□□ -0.19
RPS28-203ENST00000600659 CELSR1Q9NYQ6 3014 aa13.87□□□□□ -0.19
RPS28-203ENST00000600659 LOC102725191A0A1B0GVB3 256 aa13.87□□□□□ -0.19
RPS28-203ENST00000600659 DCTN3O75935 186 aa13.87□□□□□ -0.19
RPS28-203ENST00000600659 IFNA14P01570 189 aa13.87□□□□□ -0.19
RPS28-203ENST00000600659 NCK1P16333 377 aa13.87□□□□□ -0.19
RPS28-203ENST00000600659 GGT1P19440 569 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms