RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 FKBP6O75344 327 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 MRPL33O75394 65 aaKnown RBP12.12□□□□□ -0.47
SCAF1-203ENST00000598359 PGM3O95394 542 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 THBS1P07996 1170 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 SOD3P08294 240 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 INHBBP09529 407 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 FOSL1P15407 271 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 GGT1P19440 569 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 FKBP2P26885 142 aaKnown RBP12.12□□□□□ -0.47
SCAF1-203ENST00000598359 IDUAP35475 653 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 COPZ1P61923 177 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 SLC17A1Q14916 467 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 COQ5Q5HYK3 327 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 OTUD3Q5T2D3 398 aaPredicted RBP12.12□□□□□ -0.47
SCAF1-203ENST00000598359 LRIF1Q5T3J3 769 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 WBP2NLQ6ICG8 309 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 OR52N5Q8NH56 324 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 C3orf49Q96BT1 292 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 CLPTM1LQ96KA5 538 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 ANKRD27Q96NW4 1050 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 NAA11Q9BSU3 229 aaPredicted RBP12.12□□□□□ -0.47
SCAF1-203ENST00000598359 PRR14Q9BWN1 585 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 ESRP2Q9H6T0 727 aaKnown RBP12.12□□□□□ -0.47
SCAF1-203ENST00000598359 ADPRHL2Q9NX46 363 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 VAPAQ9P0L0 249 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 STX18Q9P2W9 335 aaKnown RBP12.12□□□□□ -0.47
SCAF1-203ENST00000598359 NKX1-2Q9UD57 310 aaPredicted RBP12.12□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF232Q9UNY5 417 aa12.12□□□□□ -0.47
SCAF1-203ENST00000598359 ARID1AO14497 2285 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 CIB4A0PJX0 185 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 OR5H1A6NKK0 313 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 C5orf58C9J3I9 102 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 FBP2O00757 339 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 AIM2O14862 343 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 EIF1BO60739 113 aaKnown RBP12.11□□□□□ -0.47
SCAF1-203ENST00000598359 ITGA5P08648 1049 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 BMP2P12643 396 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 PTNP21246 168 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF83P51522 516 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 FADDQ13158 208 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF672Q499Z4 452 aaPredicted RBP12.11□□□□□ -0.47
SCAF1-203ENST00000598359 GCNT6Q5T4J0 391 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 TSPO2Q5TGU0 170 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 C1orf146Q5VVC0 180 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 REP15Q6BDI9 236 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 PAQR6Q6TCH4 344 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 ZIC4Q8N9L1 334 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 BBS10Q8TAM1 723 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 STMN2Q93045 179 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 MUCL1Q96DR8 90 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF385AQ96PM9 386 aaKnown RBP12.11□□□□□ -0.47
SCAF1-203ENST00000598359 MDFIQ99750 246 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 C1QTNF6Q9BXI9 259 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 GSX2Q9BZM3 304 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 RAD21L1Q9H4I0 556 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 CACYBPQ9HB71 228 aaKnown RBP12.11□□□□□ -0.47
SCAF1-203ENST00000598359 BCL2L10Q9HD36 194 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 NGBQ9NPG2 151 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 SLC7A10Q9NS82 523 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 ASB6Q9NWX5 421 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 THUMPD1Q9NXG2 353 aaKnown RBP12.11□□□□□ -0.47
SCAF1-203ENST00000598359 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.11□□□□□ -0.47
SCAF1-203ENST00000598359 POMPQ9Y244 141 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 IFT52Q9Y366 437 aa12.11□□□□□ -0.47
SCAF1-203ENST00000598359 TRBV5-3A0A0A0MS03 114 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 A8MVM7 634 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 TPST1O60507 370 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 KRT36O76013 467 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 CNOT4O95628 575 aaKnown RBP12.1□□□□□ -0.47
SCAF1-203ENST00000598359 GPIP06744 558 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 ARAFP10398 606 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 AQP1P29972 269 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 LTBQ06643 244 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 LGALS3BPQ08380 585 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 SPOCK1Q08629 439 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 RCN1Q15293 331 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 TIMM23BQ5SRD1 257 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 C1orf140Q5VVS0 124 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 GPAT4Q86UL3 456 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 OR9K2Q8NGE7 335 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 TRIM2Q9C040 744 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 MALT1Q9UDY8 824 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 SLC9A8Q9Y2E8 581 aa12.1□□□□□ -0.47
SCAF1-203ENST00000598359 MAGED1Q9Y5V3 778 aaPredicted RBP12.1□□□□□ -0.47
SCAF1-203ENST00000598359 USF3Q68DE3 2245 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 AQP7P3A6NL99 342 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 TMEM229AB2RXF0 380 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 SHISA9B4DS77 424 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 ABCD4O14678 606 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 DANCRP0C864 163 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 CDH2P19022 906 aaPredicted RBP12.09□□□□□ -0.47
SCAF1-203ENST00000598359 HTR2AP28223 471 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 CDKN1AP38936 164 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 P2RY4P51582 365 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 MAP2K6P52564 334 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 ATP5J2P56134 94 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 RPS4XP62701 263 aaKnown RBP12.09□□□□□ -0.47
SCAF1-203ENST00000598359 CDK6Q00534 326 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 SLC34A1Q06495 639 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms