RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 THBDP07204 575 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 CBLP22681 906 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 CRYGSP22914 178 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 IL32P24001 234 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 GRPRP30550 384 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 OR1E2P47887 323 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 SELENOWP63302 87 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 ITGADQ13349 1161 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 GKAP1Q5VSY0 366 aaPredicted RBP12.25□□□□□ -0.45
UPF1-205ENST00000598209 FBXW9Q5XUX1 488 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 LINC00114Q6XXX2 140 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 WDR88Q6ZMY6 472 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 DEF8Q6ZN54 512 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 CDC20BQ86Y33 519 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 UBE2J2Q8N2K1 259 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 ZIC4Q8N9L1 334 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 OR6S1Q8NH40 331 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 KISS1RQ969F8 398 aaPredicted RBP12.25□□□□□ -0.45
UPF1-205ENST00000598209 TMEM45BQ96B21 275 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 S100PBPQ96BU1 408 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 ZNF385AQ96PM9 386 aaKnown RBP12.25□□□□□ -0.45
UPF1-205ENST00000598209 KCTD14Q9BQ13 255 aaPredicted RBP12.25□□□□□ -0.45
UPF1-205ENST00000598209 SPAG4Q9NPE6 437 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 PARPBPQ9NWS1 579 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 ADA2Q9NZK5 511 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 SEC14L4Q9UDX3 406 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 SLC7A7Q9UM01 511 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 RASD1Q9Y272 281 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 AKAP6Q13023 2319 aa12.25□□□□□ -0.45
UPF1-205ENST00000598209 DEFB108AA8MXU0 73 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 M0R082 166 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 SIAH2O43255 324 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 LYZL6O75951 148 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 BGLAPP02818 100 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 COX5AP20674 150 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 IGHV1-2P23083 117 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 MFSD13AQ14CX5 517 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 BHLHA15Q7RTS1 189 aaPredicted RBP12.24□□□□□ -0.45
UPF1-205ENST00000598209 AAED1Q7RTV5 226 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 CDH24Q86UP0 819 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 KDM8Q8N371 416 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 C10orf53Q8N6V4 93 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 ZNF417Q8TAU3 575 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 LZICQ8WZA0 190 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 NRGNQ92686 78 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 SLC41A3Q96GZ6 507 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 MPP4Q96JB8 637 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 ZNF587Q96SQ5 575 aaPredicted RBP12.24□□□□□ -0.45
UPF1-205ENST00000598209 ADAM21Q9UKJ8 722 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 TEX15Q9BXT5 2789 aa12.24□□□□□ -0.45
UPF1-205ENST00000598209 ANKRD17O75179 2603 aaKnown RBP12.24□□□□□ -0.45
UPF1-205ENST00000598209 PDZD2O15018 2839 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 NCK1P16333 377 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 TAS2R41P59536 307 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 LTBQ06643 244 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 FAPQ12884 760 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 TTC33Q6PID6 262 aaPredicted RBP12.23□□□□□ -0.45
UPF1-205ENST00000598209 CREB3L2Q70SY1 520 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 CBLL1Q75N03 491 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 H1FNTQ75WM6 255 aaPredicted RBP12.23□□□□□ -0.45
UPF1-205ENST00000598209 VTCN1Q7Z7D3 282 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 WFDC8Q8IUA0 241 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 EPHX4Q8IUS5 362 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 PGAM4Q8N0Y7 254 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 FITM2Q8N6M3 262 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 ZNF433Q8N7K0 673 aaPredicted RBP12.23□□□□□ -0.45
UPF1-205ENST00000598209 CCDC197Q8NCU1 140 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 FAM162AQ96A26 154 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 PIK3IP1Q96FE7 263 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 OXGR1Q96P68 337 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 MOGAT1Q96PD6 335 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 PRSS27Q9BQR3 290 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 ASPNQ9BXN1 380 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 POLR2J2Q9GZM3 115 aaKnown RBP12.23□□□□□ -0.45
UPF1-205ENST00000598209 POLR2J3Q9H1A7 115 aaKnown RBP12.23□□□□□ -0.45
UPF1-205ENST00000598209 SLC7A10Q9NS82 523 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 ASB6Q9NWX5 421 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 UPB1Q9UBR1 384 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 MALT1Q9UDY8 824 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 B3GALT5Q9Y2C3 310 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 CORINQ9Y5Q5 1042 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 SPG11Q96JI7 2443 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 POLQO75417 2590 aa12.23□□□□□ -0.45
UPF1-205ENST00000598209 CREBBPQ92793 2442 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 LRRN3E7EW58 273 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 OR5F1O95221 314 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 ZNF682O95780 498 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 SERPINA1P01009 418 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 NQO1P15559 274 aaKnown RBP12.22□□□□□ -0.45
UPF1-205ENST00000598209 ZNF43P17038 809 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 GGT1P19440 569 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 FOXG1P55316 489 aaPredicted RBP12.22□□□□□ -0.45
UPF1-205ENST00000598209 SLC25A3Q00325 362 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 IL1RL1Q01638 556 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 PIN1Q13526 163 aaPredicted RBP12.22□□□□□ -0.45
UPF1-205ENST00000598209 KRT72Q14CN4 511 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 TSPO2Q5TGU0 170 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 ALKBH2Q6NS38 261 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 RNF148Q8N7C7 305 aa12.22□□□□□ -0.45
UPF1-205ENST00000598209 SCAIQ8N9R8 606 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms