RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 B9A039 149 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 SDHDO14521 159 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 CRYAAP02489 173 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 OR4A8P0C604 315 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 PRG2P13727 222 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 CALCRP30988 508 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 ANXA11P50995 505 aaKnown RBP14.21□□□□□ -0.13
LIG1-205ENST00000593425 MVDP53602 400 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 TXNL4AP83876 142 aaKnown RBP14.21□□□□□ -0.13
LIG1-205ENST00000593425 IQCCQ4KMZ1 466 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 TMEM225Q6GV28 225 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 WBP2NLQ6ICG8 309 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 NIPAL3Q6P499 406 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 MYPOPQ86VE0 399 aaPredicted RBP14.21□□□□□ -0.13
LIG1-205ENST00000593425 EPHX4Q8IUS5 362 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 ZNF440Q8IYI8 595 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 BCL2L2Q92843 193 aaPredicted RBP14.21□□□□□ -0.13
LIG1-205ENST00000593425 KCNS3Q9BQ31 491 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 TMEM109Q9BVC6 243 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 TAPBPLQ9BX59 468 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 MYOZ1Q9NP98 299 aaPredicted RBP14.21□□□□□ -0.13
LIG1-205ENST00000593425 CHST2Q9Y4C5 530 aa14.21□□□□□ -0.13
LIG1-205ENST00000593425 ARPC4-TTLL3A0A0A6YYG9 625 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 A8MVM7 634 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 PDE5AO76074 875 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 TGFAP01135 160 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 IGLV1-44P01699 117 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 BCHEP06276 602 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 CELA3BP08861 270 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 ZNF23P17027 643 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 UBE2NP61088 152 aaKnown RBP14.2□□□□□ -0.14
LIG1-205ENST00000593425 EFNB3Q15768 340 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 KRT71Q3SY84 523 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 LIN52Q52LA3 116 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 RPS26P11Q5JNZ5 115 aaPredicted RBP14.2□□□□□ -0.14
LIG1-205ENST00000593425 C1orf140Q5VVS0 124 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 PRAMEF8Q5VWM4 474 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 PRAMEF7Q5VXH5 474 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 ANKRD16Q6P6B7 361 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 CLIP4Q8N3C7 705 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 PLK3Q9H4B4 646 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 ZNF443Q9Y2A4 671 aaPredicted RBP14.2□□□□□ -0.14
LIG1-205ENST00000593425 GPR45Q9Y5Y3 372 aa14.2□□□□□ -0.14
LIG1-205ENST00000593425 LRP5LA4QPB2 252 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 TMEM229AB2RXF0 380 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 TM9SF1O15321 606 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 NPIPB7O75200 414 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 SNUPNO95149 360 aaKnown RBP14.19□□□□□ -0.14
LIG1-205ENST00000593425 VAMP5O95183 116 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 C8BP07358 591 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 ETFAP13804 333 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 PPOXP50336 477 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 STX3Q13277 289 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 MPP2Q14168 576 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 SERPINA11Q86U17 422 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 KDM8Q8N371 416 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 MAGEE2Q8TD90 523 aaPredicted RBP14.19□□□□□ -0.14
LIG1-205ENST00000593425 LINC00470Q9BZP3 86 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 SSU72Q9NP77 194 aaKnown RBP14.19□□□□□ -0.14
LIG1-205ENST00000593425 P2RX2Q9UBL9 471 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 SEC14L4Q9UDX3 406 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 ANK2Q01484 3957 aa14.19□□□□□ -0.14
LIG1-205ENST00000593425 ZNF503-AS2A6NEH8 195 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 FTCDNL1E5RQL4 147 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 HAX1O00165 279 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 RFXANKO14593 260 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 STAMBPO95630 424 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 KRT75O95678 551 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 IGKV3-15P01624 115 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 TFPTP0C1Z6 253 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 PNMTP11086 282 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 NCF2P19878 526 aaPredicted RBP14.18□□□□□ -0.14
LIG1-205ENST00000593425 HNF1AP20823 631 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 IL2RGP31785 369 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 IDH3GP51553 393 aaPredicted RBP14.18□□□□□ -0.14
LIG1-205ENST00000593425 COPZ1P61923 177 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 ROR2Q01974 943 aaKnown RBP14.18□□□□□ -0.14
LIG1-205ENST00000593425 HGFACQ04756 655 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 BST1Q10588 318 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 CR1LQ2VPA4 569 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 C3orf36Q3SXR2 165 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 GTDC1Q4AE62 458 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 RNF220Q5VTB9 566 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 KIRREL3Q8IZU9 778 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 ZCCHC24Q8N2G6 241 aaKnown RBP14.18□□□□□ -0.14
LIG1-205ENST00000593425 SLC38A5Q8WUX1 472 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 ZNF317Q96PQ6 595 aaPredicted RBP14.18□□□□□ -0.14
LIG1-205ENST00000593425 PTDSS2Q9BVG9 487 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 WDR55Q9H6Y2 383 aaPredicted RBP14.18□□□□□ -0.14
LIG1-205ENST00000593425 RASD1Q9Y272 281 aa14.18□□□□□ -0.14
LIG1-205ENST00000593425 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.18□□□□□ -0.141e-6■■■■□ 25.3
LIG1-205ENST00000593425 hCG_2039718K7EN88 272 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 RGS16O15492 202 aaPredicted RBP14.17□□□□□ -0.14
LIG1-205ENST00000593425 ZNF432O94892 652 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 AHSA1O95433 338 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 IGFBP1P08833 259 aaPredicted RBP14.17□□□□□ -0.14
LIG1-205ENST00000593425 PAX7P23759 505 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 EPHA3P29320 983 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 THBS4P35443 961 aa14.17□□□□□ -0.14
LIG1-205ENST00000593425 RPS5P46782 204 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms