RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 BGLAPP02818 100 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 MT-ND1P03886 318 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 GRPRP30550 384 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 UGT2B15P54855 530 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 TMEM225Q6GV28 225 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 LUZP2Q86TE4 346 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 ZDHHC21Q8IVQ6 265 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 PIK3C3Q8NEB9 887 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 PFN4Q8NHR9 129 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF417Q8TAU3 575 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 LRRC46Q96FV0 321 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 MOGAT1Q96PD6 335 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF587Q96SQ5 575 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-221ENST00000593026 ANKRD19PQ9H560 264 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 MAGIXQ9H6Y5 334 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 C12orf49Q9H741 205 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 NMNAT1Q9HAN9 279 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-221ENST00000593026 CHST11Q9NPF2 352 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 IL1RAPQ9NPH3 570 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 MEPEQ9NQ76 525 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-221ENST00000593026 MAN2C1Q9NTJ4 1040 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 SLC7A8Q9UHI5 535 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 PROCRQ9UNN8 238 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 POMPQ9Y244 141 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 MED31Q9Y3C7 131 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 CORINQ9Y5Q5 1042 aa13.29□□□□□ -0.28
DDX39A-221ENST00000593026 INTS1Q8N201 2190 aaKnown RBP13.29□□□□□ -0.28
DDX39A-221ENST00000593026 A0A1W2PRQ8 180 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 AQP12BA6NM10 295 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 ENO4A6NNW6 628 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 LRRN3E7EW58 273 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 MSTNO14793 375 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 VAMP5O95183 116 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 CH25HO95992 272 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 CGAP01215 116 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 H1F0P07305 194 aaKnown RBP13.28□□□□□ -0.28
DDX39A-221ENST00000593026 CD8BP10966 210 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 NQO1P15559 274 aaKnown RBP13.28□□□□□ -0.28
DDX39A-221ENST00000593026 SLC16A1P53985 500 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 CHRNB3Q05901 458 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 LTBQ06643 244 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 TFF3Q07654 80 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 DGCR6Q14129 220 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 SLC17A1Q14916 467 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF74Q16587 644 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 IQCCQ4KMZ1 466 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 FAM98BQ52LJ0 330 aaKnown RBP13.28□□□□□ -0.28
DDX39A-221ENST00000593026 FGD3Q5JSP0 725 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 H1FNTQ75WM6 255 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-221ENST00000593026 ASRGL1Q7L266 308 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 NUFIP2Q7Z417 695 aaKnown RBP13.28□□□□□ -0.28
DDX39A-221ENST00000593026 GPAT4Q86UL3 456 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 AQP12AQ8IXF9 295 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 ADPRHL1Q8NDY3 354 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF775Q96BV0 537 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-221ENST00000593026 ZNF347Q96SE7 839 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 SF3B5Q9BWJ5 86 aaKnown RBP13.28□□□□□ -0.28
DDX39A-221ENST00000593026 OPN3Q9H1Y3 402 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-221ENST00000593026 JKAMPQ9P055 326 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 SEC14L4Q9UDX3 406 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 PLEKHB1Q9UF11 243 aaPredicted RBP13.28□□□□□ -0.28
DDX39A-221ENST00000593026 RASD1Q9Y272 281 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 B3GALT5Q9Y2C3 310 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 DOPEY2Q9Y3R5 2298 aa13.28□□□□□ -0.28
DDX39A-221ENST00000593026 CACNA1CQ13936 2221 aa13.27□□□□□ -0.28
DDX39A-221ENST00000593026 IGF2P01344 180 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 UMPSP11172 480 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 FUT4P22083 530 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 P2RY4P51582 365 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 SMIM11AP58511 58 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 SPIBQ01892 262 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 PMS2P3Q13401 168 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 FBXL19-AS1Q494R0 122 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 ZNF730Q6ZMV8 503 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 PIWIL3Q7Z3Z3 882 aaKnown RBP13.27□□□□□ -0.29
DDX39A-221ENST00000593026 GALNT5Q7Z7M9 940 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 STK32CQ86UX6 486 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 SPATA24Q86W54 205 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 SCAIQ8N9R8 606 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 OR9K2Q8NGE7 335 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 ACOT11Q8WXI4 607 aaPredicted RBP13.27□□□□□ -0.29
DDX39A-221ENST00000593026 RNASE6Q93091 150 aaKnown RBP13.27□□□□□ -0.29
DDX39A-221ENST00000593026 SGTBQ96EQ0 304 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 RBM24Q9BX46 236 aaKnown RBP13.27□□□□□ -0.29
DDX39A-221ENST00000593026 FKRPQ9H9S5 495 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 NANSQ9NR45 359 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 PLSCR4Q9NRQ2 329 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 C20orf141Q9NUB4 165 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 MRPL39Q9NYK5 338 aaKnown RBP13.27□□□□□ -0.29
DDX39A-221ENST00000593026 FOXD3Q9UJU5 478 aaPredicted RBP13.27□□□□□ -0.29
DDX39A-221ENST00000593026 NOSIPQ9Y314 301 aaKnown RBP13.27□□□□□ -0.29
DDX39A-221ENST00000593026 TESMINQ9Y4I5 508 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 FLVCR1Q9Y5Y0 555 aa13.27□□□□□ -0.29
DDX39A-221ENST00000593026 SPTBN1Q01082 2364 aaKnown RBP13.27□□□□□ -0.29
DDX39A-221ENST00000593026 A0A087WUU8 490 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 DHRS12A0PJE2 317 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 HTR3EA5X5Y0 456 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 A8MXE2 369 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 PIP5K1CO60331 668 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 OR7A10O76100 309 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms