RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 PCMT1P22061 227 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 CD79BP40259 229 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 FXYD6P3P58550 94 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 POU4F2Q12837 409 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 NKPD1Q17RQ9 610 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 SMRP1Q8NCR6 262 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 DNAAF1Q8NEP3 725 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 OR4C15Q8NGM1 316 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 MUTYHQ9UIF7 546 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 BAIAP2Q9UQB8 552 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 NSA2O95478 260 aaKnown RBP13.39□□□□□ -0.27
RETREG3-208ENST00000589797 SNU13P55769 128 aaKnown RBP13.39□□□□□ -0.27
RETREG3-208ENST00000589797 OCLNQ16625 522 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 SETD6Q8TBK2 473 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 FCAMRQ8WWV6 532 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 CDCA4Q9BXL8 241 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 IRF2BPLQ9H1B7 796 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 KLHL9Q9P2J3 617 aa13.39□□□□□ -0.27
RETREG3-208ENST00000589797 FXYD6-FXYD2A0A087WZ82 144 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 RBBP9O75884 186 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 FOLR1P15328 257 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 GIFP27352 417 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 XKRXQ6PP77 449 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 TRIM63Q969Q1 353 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 TMEM106AQ96A25 262 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 KLHL15Q96M94 604 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 FXYD6Q9H0Q3 95 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 GPN1Q9HCN4 374 aaPredicted RBP13.38□□□□□ -0.27
RETREG3-208ENST00000589797 NOX4Q9NPH5 578 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 HPF1Q9NWY4 346 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 IGHV1OR15-9A0A0B4J2B8 117 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 SULT2B1O00204 365 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 MBTPS2O43462 519 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 PTTG1O95997 202 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 BCKDHBP21953 392 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 OR3A3P47888 321 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 OR3A2P47893 321 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 PITPNBP48739 271 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 E2F1Q01094 437 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 SLC18B1Q6NT16 456 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 SIRT6Q8N6T7 355 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 GALNT6Q8NCL4 622 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 PRDM9Q9NQV7 894 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 MTCH2Q9Y6C9 303 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 LMO7DNF2Z398 122 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 MT-ND4P03905 459 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 ITGA3P26006 1051 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 MAB21L1Q13394 359 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 SMAD4Q13485 552 aaKnown RBP13.38□□□□□ -0.27
RETREG3-208ENST00000589797 CBFBQ13951 182 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 CORO6Q6QEF8 472 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 OR13C3Q8NGS6 347 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 OR14L1PQ8NHC6 308 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
RETREG3-208ENST00000589797 SLC22A8Q8TCC7 542 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 ZNF566Q969W8 418 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 LMF2Q9BU23 707 aaKnown RBP13.38□□□□□ -0.27
RETREG3-208ENST00000589797 KLHL21Q9UJP4 597 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 SRPK3Q9UPE1 567 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 SLCO1B1Q9Y6L6 691 aa13.38□□□□□ -0.27
RETREG3-208ENST00000589797 TMED7-TICAM2A0A0A6YYA0 188 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 BRINP1O60477 761 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 SLC19A2O60779 497 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 MAPK3P27361 379 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-208ENST00000589797 NUP62P37198 522 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-208ENST00000589797 GPR85P60893 370 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 GDPD1Q8N9F7 314 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 GPBAR1Q8TDU6 330 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 GCDHQ92947 438 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-208ENST00000589797 SLC46A1Q96NT5 459 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 STACQ99469 402 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 CCDC32Q9BV29 185 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 SLIRPQ9GZT3 109 aaKnown RBP13.37□□□□□ -0.27
RETREG3-208ENST00000589797 CPNE5Q9HCH3 593 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 TMED7Q9Y3B3 224 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 A0A0G2JMP0 313 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 A0A0X1KG70 313 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 SURF4O15260 269 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 GPANK1O95872 356 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 YES1P07947 543 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 CD14P08571 375 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 UCHL1P09936 223 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 CCR5P51681 352 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 GLO1Q04760 184 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 NR0B2Q15466 257 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 MEP1BQ16820 701 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 KIF18BQ86Y91 864 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 SHISA5Q8N114 240 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 SLC22A18ASQ8N1D0 253 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 OR2L13Q8N349 312 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 OR4M2Q8NGB6 313 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 ZNF717Q9BY31 904 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-208ENST00000589797 FKBP14Q9NWM8 211 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 PATJQ8NI35 1801 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 SERTM1A2A2V5 107 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 IL33O95760 270 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 PTH2RP49190 550 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 SRP9P49458 86 aaKnown RBP13.37□□□□□ -0.27
RETREG3-208ENST00000589797 ZNF81P51508 661 aa13.37□□□□□ -0.27
RETREG3-208ENST00000589797 TBC1D25Q3MII6 688 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms