RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 OR12D2P58182 307 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 FUT7Q11130 342 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 MRPL28Q13084 256 aaKnown RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 GGTLC2Q14390 218 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 GRM7Q14831 915 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 P2RY14Q15391 338 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 DEFB110Q30KQ9 67 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 FCRLBQ6BAA4 426 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 DMKNQ6E0U4 476 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 FAAH2Q6GMR7 532 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 WBP2NLQ6ICG8 309 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ZAR1Q86SH2 424 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 NOXA1Q86UR1 476 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF761Q86XN6 746 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 UBE2J2Q8N2K1 259 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SDR16C5Q8N3Y7 309 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ASCC1Q8N9N2 400 aaKnown RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 OR4K13Q8NH42 304 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 OR14A16Q8NHC5 309 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 GRPEL2Q8TAA5 225 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 TRIM63Q969Q1 353 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SMIM19Q96E16 107 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ZDHHC12Q96GR4 267 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 CMTM3Q96MX0 182 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 MRI1Q9BV20 369 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 IFT22Q9H7X7 185 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SOHLH2Q9NX45 425 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 WSB2Q9NYS7 404 aaPredicted RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 NLKQ9UBE8 527 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 CHRNA9Q9UGM1 479 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 ERVK-19Q9WJR5 959 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 RASD1Q9Y272 281 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 SLC6A5Q9Y345 797 aa6.78□□□□□ -1.32
ZNF540-206ENST00000589117 RBMX2Q9Y388 322 aaKnown RBP6.78□□□□□ -1.32
ZNF540-206ENST00000589117 LILRA5A6NI73 299 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 NPIPB9F8W1W9 429 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 FZD7O75084 574 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CDC123O75794 336 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 OR7A10O76100 309 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 HIST1H2ABP04908 130 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CT45A8P0DMV1 189 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CT45A9P0DMV2 189 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 APEHP13798 732 aaKnown RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 LCN1P31025 176 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 DIO1P49895 249 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 GDI2P50395 445 aaKnown RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CLDN20P56880 219 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 BTG1P62324 171 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF85Q03923 595 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 FZD5Q13467 585 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 INSL4Q14641 139 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CDK10Q15131 360 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SF3B4Q15427 424 aaKnown RBP eCLIP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CT45A2Q5DJT8 189 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 KIRREL2Q6UWL6 708 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 HIST3H2AQ7L7L0 130 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 OVCH1Q7RTY7 1134 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SLC35F2Q8IXU6 374 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 TCTE3Q8IZS6 198 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ARHGEF39Q8N4T4 335 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 C10orf53Q8N6V4 93 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 BCORP1Q8N888 145 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 OR4N2Q8NGD1 307 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 C16orf52Q8NHV5 167 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF417Q8TAU3 575 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 TRMT10AQ8TBZ6 339 aaKnown RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 HIST1H2ACQ93077 130 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SENP5Q96HI0 755 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 DCLRE1CQ96SD1 692 aaKnown RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF587Q96SQ5 575 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 TIMP4Q99727 224 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 WACQ9BTA9 647 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CHRNA10Q9GZZ6 450 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 GPR27Q9NS67 375 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 STMN3Q9NZ72 180 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 GMEB2Q9UKD1 530 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 MOKQ9UQ07 419 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SIRT4Q9Y6E7 314 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 A0A0G2JMP0 313 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 A0A0X1KG70 313 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 TLCD2A6NGC4 264 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 C10orf142B7Z368 130 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 TMEM150CB9EJG8 249 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 INMT-MINDY4F8WBC2 141 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 FOXS1O43638 330 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ITGA10O75578 1167 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SC5DO75845 299 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 IGKV1D-16P01601 117 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 GYPBP06028 91 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CELA2BP08218 269 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CLUP10909 449 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 NAT2P11245 290 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ALAS2P22557 587 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 RORAP35398 523 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ECI1P42126 302 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 PPICP45877 212 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 PPP1CAP62136 330 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 TFF2Q03403 129 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 KLHL26Q53HC5 615 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms