RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PIN1Q13526 163 aaPredicted RBP7.07□□□□□ -1.28
VMP1-204ENST00000587259 FGFBP1Q14512 234 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 MEDAGQ5VYS4 303 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 PGBD2Q6P3X8 592 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 PODNL1Q6PEZ8 512 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 FIGNL1Q6PIW4 674 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 KLHL17Q6TDP4 642 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 HSDL2Q6YN16 418 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 MBOAT2Q6ZWT7 520 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 GPR141Q7Z602 305 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 PRIMA1Q86XR5 153 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 KRTAP1-3Q8IUG1 177 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 CDK20Q8IZL9 346 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 CIARTQ8N365 385 aaPredicted RBP7.07□□□□□ -1.28
VMP1-204ENST00000587259 MEIOBQ8N635 442 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 OR4K5Q8NGD3 323 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 ZNF420Q8TAQ5 688 aaPredicted RBP7.07□□□□□ -1.28
VMP1-204ENST00000587259 TEX47Q8TBZ9 253 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 SLC7A13Q8TCU3 470 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 SLC2A12Q8TD20 617 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 PIK3R3Q92569 461 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 OSTF1Q92882 214 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 NINJ1Q92982 152 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 MYDGFQ969H8 173 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 DGCR14Q96DF8 476 aaKnown RBP7.07□□□□□ -1.28
VMP1-204ENST00000587259 SLC41A3Q96GZ6 507 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 SLC38A2Q96QD8 506 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 NIPSNAP1Q9BPW8 284 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 FAM173AQ9BQD7 235 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 FUZQ9BT04 418 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 QRSL1Q9H0R6 528 aaKnown RBP7.07□□□□□ -1.28
VMP1-204ENST00000587259 PROK2Q9HC23 129 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 EXOSC3Q9NQT5 275 aaKnown RBP7.07□□□□□ -1.28
VMP1-204ENST00000587259 UBQLN4Q9NRR5 601 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 PLCXD1Q9NUJ7 323 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 PPIEQ9UNP9 301 aaKnown RBP7.07□□□□□ -1.28
VMP1-204ENST00000587259 GPR55Q9Y2T6 319 aaPredicted RBP7.07□□□□□ -1.28
VMP1-204ENST00000587259 KCNE3Q9Y6H6 103 aa7.07□□□□□ -1.28
VMP1-204ENST00000587259 JMJD1CQ15652 2540 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 A0A1B0GVC2 190 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 A0A1W2PQD3 144 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 LRRC3CA6NJW4 275 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 CPSF4LA6NMK7 179 aaKnown RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 NPIPB9F8W1W9 429 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 H3BN98 237 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 AQP7O14520 342 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 TO15178 435 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 MITFO75030 526 aaPredicted RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 FAM20BO75063 409 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 ATE1O95260 518 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 IL33O95760 270 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 EPPINO95925 133 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 GASTP01350 101 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 P04436 131 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 NGFRP08138 427 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 CT45A8P0DMV1 189 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 CT45A9P0DMV2 189 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 JUNBP17275 347 aaPredicted RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 IL12BP29460 328 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 ALDH3B2P48448 385 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 IDH2P48735 452 aaKnown RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 TMED10P49755 219 aaKnown RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 SLC10A1Q14973 349 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 PTGES3Q15185 160 aaKnown RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 NPTX1Q15818 432 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 ZBED5Q49AG3 693 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 CT45A2Q5DJT8 189 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 CCNJQ5T5M9 372 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 BICRALQ6AI39 1079 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 SLC27A4Q6P1M0 643 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 POMZP3Q6PJE2 187 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 PAMR1Q6UXH9 720 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 RTL4Q6ZR62 310 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 RASSF6Q6ZTQ3 369 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 LACC1Q8IV20 430 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 MISPQ8IVT2 679 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 C9orf40Q8IXQ3 194 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 ZNF614Q8N883 585 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 LSMEM1Q8N8F7 131 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 OR4D11Q8NGI4 311 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 OR8J1Q8NGP2 316 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 OR8K3Q8NH51 312 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 NUBPLQ8TB37 319 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 DNAJA4Q8WW22 397 aaPredicted RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 GTPBP3Q969Y2 492 aaKnown RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 TP53INP1Q96A56 240 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 SENP5Q96HI0 755 aaPredicted RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 NODALQ96S42 347 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 BCL7BQ9BQE9 202 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 ITPAQ9BY32 194 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 NDEL1Q9GZM8 345 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 SLC25A19Q9HC21 320 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 MAN2C1Q9NTJ4 1040 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 SACM1LQ9NTJ5 587 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 MED17Q9NVC6 651 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 CLN6Q9NWW5 311 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 CNOT2Q9NZN8 540 aaKnown RBP7.06□□□□□ -1.28
VMP1-204ENST00000587259 RHCGQ9UBD6 479 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 RPS6KB2Q9UBS0 482 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms