RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 ZNF74Q16587 644 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 TMEM201Q5SNT2 666 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 SEM1Q6ZVN7 128 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 H1FNTQ75WM6 255 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 NANOGNBQ7Z5D8 188 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 NRMQ8IXM6 262 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 MARVELD2Q8N4S9 558 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 ADPRHL1Q8NDY3 354 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 OR5J2Q8NH18 312 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 STMN2Q93045 179 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 INTS12Q96CB8 462 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 DUS3LQ96G46 650 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 ALPK1Q96QP1 1244 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 SF3B5Q9BWJ5 86 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 SFXN3Q9BWM7 321 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 NDEL1Q9GZM8 345 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 MEPEQ9NQ76 525 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 ARMC1Q9NVT9 282 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 MRPL39Q9NYK5 338 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 DNAJB9Q9UBS3 223 aa13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 PHF3Q92576 2039 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-209ENST00000585335 SMG1Q96Q15 3661 aaKnown RBP13.02□□□□□ -0.32
SCAMP4-209ENST00000585335 SPENQ96T58 3664 aaKnown RBP13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 A0A0G2JNJ9 132 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 TRBV4-1A0A0J9YWV2 114 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 SH3PXD2BA1X283 911 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 KDM4EB2RXH2 506 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 M0R082 166 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 PIP5K1CO60331 668 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 OR10H3O60404 316 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 FZD7O75084 574 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 SS18L1O75177 396 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 E2F6O75461 281 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 CCNB2O95067 398 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 IL18BPO95998 194 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 LDLRP01130 860 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 ARHGDIAP52565 204 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 H3F3AP84243 136 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 PRKCDQ05655 676 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 ABLIM2Q6H8Q1 611 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 XKRXQ6PP77 449 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 PLXDC2Q6UX71 529 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 GCNT2Q8N0V5 402 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 TMEM99Q8N816 258 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 CNEP1R1Q8N9A8 125 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 OR4K5Q8NGD3 323 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 ZNF417Q8TAU3 575 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 ABHD3Q8WU67 409 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 SLCO4A1Q96BD0 722 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 MOGAT1Q96PD6 335 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 ZNF587Q96SQ5 575 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 DENND2DQ9H6A0 471 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 KLHL13Q9P2N7 655 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 ZNF629Q9UEG4 869 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 Q9UFV3 132 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 LYVE1Q9Y5Y7 322 aa13.02□□□□□ -0.33
SCAMP4-209ENST00000585335 ARHGAP21Q5T5U3 1957 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 A0A1W2PNV4 684 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 ZNF724A8MTY0 619 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 EFCAB9A8MZ26 197 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 CLOCKO15516 846 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 TIPRLO75663 272 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 TOXO94900 526 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 YES1P07947 543 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 FUT1P19526 365 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 AGAP20933 346 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 FASP25445 335 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 SLC9A3P48764 834 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 HMGA2P52926 109 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 SLC16A1P53985 500 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 SIRPAP78324 504 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 C1DQ13901 141 aaKnown RBP13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 EXOC3L2Q2M3D2 409 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 ANKDD1AQ495B1 522 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 TBPL2Q6SJ96 375 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 NCCRP1Q6ZVX7 275 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 ZNF771Q7L3S4 317 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 FAM214BQ7L5A3 538 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 CCDC103Q8IW40 242 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 ZNF808Q8N4W9 903 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 FAM26EQ8N5C1 309 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 OR6K3Q8NGY3 331 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 CA5BP1Q8WTZ4 195 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 LIPHQ8WWY8 451 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 SDCCAG3Q96C92 435 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 PSD2Q9BQI7 771 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 BDH2Q9BUT1 245 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 PIGMQ9H3S5 423 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 BCO1Q9HAY6 547 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 C20orf141Q9NUB4 165 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 RNF6Q9Y252 685 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 U3KQV3 271 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 MPDZO75970 2070 aa13.01□□□□□ -0.33
SCAMP4-209ENST00000585335 KIAA1549Q9HCM3 1950 aa13□□□□□ -0.33
SCAMP4-209ENST00000585335 IGKV3D-15A0A087WSY6 115 aa13□□□□□ -0.33
SCAMP4-209ENST00000585335 LRRN3E7EW58 273 aa13□□□□□ -0.33
SCAMP4-209ENST00000585335 AKAP8O43823 692 aaKnown RBP13□□□□□ -0.33
SCAMP4-209ENST00000585335 ZG16O60844 167 aa13□□□□□ -0.33
SCAMP4-209ENST00000585335 ADORA3P0DMS8 318 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms