RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 NME1P15531 152 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 ARSBP15848 533 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 HOXD12P35452 270 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 RPL27P61353 136 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 CDK10Q15131 360 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ATAD3CQ5T2N8 411 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 PRAMEF17Q5VTA0 474 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 PRAMEF9Q5VWM5 478 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 FAM111BQ6SJ93 734 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 LAX1Q8IWV1 398 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 FAM160A2Q8N612 972 aaPredicted RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 LINC01555Q8NAE3 123 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 FAM71CQ8NEG0 241 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SPTSSAQ969W0 71 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ZMYND19Q96E35 227 aaPredicted RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 DMRTB1Q96MA1 342 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 FAM86C1Q9NVL1 165 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 CXXC1Q9P0U4 656 aaPredicted RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 DKKL1Q9UK85 242 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 CES1P1Q9UKY3 287 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SHROOM3Q8TF72 1996 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 LINC01387J3KSC0 135 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 RGS13O14921 159 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 FGF17O60258 216 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 HPGDSO60760 199 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 AFF3P51826 1226 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 FAPQ12884 760 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 RUNX2Q13950 521 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SWI5Q1ZZU3 235 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 NKAIN4Q8IVV8 208 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ARL14Q8N4G2 192 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 DCBLD2Q96PD2 775 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 C11orf54Q9H0W9 315 aaPredicted RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 SPHK1Q9NYA1 384 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 FOXJ3Q9UPW0 622 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SIGLEC7Q9Y286 467 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 TRPM7Q96QT4 1865 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 PATJQ8NI35 1801 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 LOC102725191A0A1B0GVB3 256 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 OR6C65A6NJZ3 312 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 CER1O95813 267 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 GIPP09681 153 aaPredicted RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 NAT2P11245 290 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 CXCL12P48061 93 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ARHGDIBP52566 201 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 CLDN2P57739 230 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 TRA2AQ13595 282 aaKnown RBP eCLIP5.38□□□□□ -1.55
RTTN-209ENST00000583043 EXOSC7Q15024 291 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 TP53I3Q53FA7 332 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 FIP1L1Q6UN15 594 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 PARM1Q6UWI2 310 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ZNF793Q6ZN11 406 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 PXKQ7Z7A4 578 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SPAG16Q8N0X2 631 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 DNAAF1Q8NEP3 725 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ZFAND1Q8TCF1 268 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 EDAQ92838 391 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ZNF681Q96N22 645 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SIGLEC11Q96RL6 698 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 MYO16Q9Y6X6 1858 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 METTL12A8MUP2 240 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 LMO7DNF2Z398 122 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 GPR171O14626 319 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 TPD52L2O43399 206 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 LDB3O75112 727 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 PMS2P2O95744 297 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 CSTBP04080 98 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 GRB2P62993 217 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 EEF1A1P68104 462 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 TLE3Q04726 772 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ARFRP1Q13795 201 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 TMEM225Q6GV28 225 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 C19orf48Q6RUI8 117 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 VN1R4Q7Z5H5 301 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SPEM1Q8N4L4 309 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 OR13H1Q8NG92 308 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SENP5Q96HI0 755 aaPredicted RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 SRA1Q9HD15 236 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 CENPMQ9NSP4 180 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 GLTPQ9NZD2 209 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 RAB22AQ9UL26 194 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 SLC7A11Q9UPY5 501 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 B3GALT5Q9Y2C3 310 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 A0A1B0GUH1 482 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 FTCDNL1E5RQL4 147 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 NPIPA2E9PIF3 369 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 NPIPA3F8WFD2 350 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 CSF2P04141 144 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 TCRBP04435 133 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 PRKACBP22694 351 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 CDK2P24941 298 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 MAN2A2P49641 1150 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 CSNK1EP49674 416 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 MLLT10P55197 1068 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 UBE2MP61081 183 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 CNN3Q15417 329 aaKnown RBP5.38□□□□□ -1.55
RTTN-209ENST00000583043 CD200R1LQ6Q8B3 271 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ZNF101Q8IZC7 436 aa5.38□□□□□ -1.55
RTTN-209ENST00000583043 ARIH2OSQ8N7S6 290 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms