RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 ZNF527Q8NB42 609 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 C3orf49Q96BT1 292 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 ZNF578Q96N58 590 aaPredicted RBP12.51□□□□□ -0.41
SRSF1-205ENST00000582730 JAM3Q9BX67 310 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 EVA1AQ9H8M9 152 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 HLA-DQB1P01920 261 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 INPP1P49441 399 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 FHL1Q13642 323 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 ZBTB37Q5TC79 503 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 GPALPP1Q8IXQ4 340 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 LRRC20Q8TCA0 184 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 PTPMT1Q8WUK0 201 aaPredicted RBP12.51□□□□□ -0.41
SRSF1-205ENST00000582730 PELOQ9BRX2 385 aaKnown RBP12.51□□□□□ -0.41
SRSF1-205ENST00000582730 MARVELD1Q9BSK0 173 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 CCDC86Q9H6F5 360 aaKnown RBP12.51□□□□□ -0.41
SRSF1-205ENST00000582730 UCK1Q9HA47 277 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 COQ3Q9NZJ6 369 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 EIF3KQ9UBQ5 218 aaKnown RBP12.51□□□□□ -0.41
SRSF1-205ENST00000582730 EPHA6Q9UF33 1036 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 GMEB2Q9UKD1 530 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 ZMIZ1Q9ULJ6 1067 aa12.51□□□□□ -0.41
SRSF1-205ENST00000582730 PIAS2O75928 621 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 SLC2A5P22732 501 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 ZP2Q05996 745 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 PXDC1Q5TGL8 231 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 SHISA6Q6ZSJ9 500 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 SLC51BQ86UW2 128 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 CMIPQ8IY22 773 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 SNX33Q8WV41 574 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 HYLS1Q96M11 299 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 ZNF285Q96NJ3 590 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 PPIL3Q9H2H8 161 aaKnown RBP12.5□□□□□ -0.41
SRSF1-205ENST00000582730 UBQLN4Q9NRR5 601 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 INPP5EQ9NRR6 644 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 CHRNA9Q9UGM1 479 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 TEX51A0A1B0GUA7 166 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 A0A1B0GVC2 190 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 A0A1B0GVT2 93 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 A6NIN4 97 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 PSMD9O00233 223 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 ORC5O43913 435 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 UTS2O95399 124 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 NUDT14O95848 222 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 PDGFAP04085 211 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 F8A1P23610 371 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 GRK6P43250 576 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 BDH1Q02338 343 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 PON3Q15166 354 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 LYPD4Q6UWN0 246 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 ZNF687Q8N1G0 1237 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 CADM4Q8NFZ8 388 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 MOSPD2Q8NHP6 518 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 ZPLD1Q8TCW7 415 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 CNN2Q99439 309 aaKnown RBP12.5□□□□□ -0.41
SRSF1-205ENST00000582730 DPYSL5Q9BPU6 564 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 ERVMER34-1Q9H9K5 563 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 LANCL2Q9NS86 450 aa12.5□□□□□ -0.41
SRSF1-205ENST00000582730 KHNYNO15037 678 aaKnown RBP12.49□□□□□ -0.41
SRSF1-205ENST00000582730 SLC43A1O75387 559 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 PPM1BO75688 479 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 TFP02787 698 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 CLPSP04118 112 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 ITPKBP27987 946 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 RORAP35398 523 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 AQP2P41181 271 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 SLC37A1P57057 533 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 FOXL2P58012 376 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 OR10A3P58181 314 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 ACTC1P68032 377 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 ACTA1P68133 377 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 HSD11B2P80365 405 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 NSDHLQ15738 373 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.49□□□□□ -0.412e-12■■□□□ 11.6
SRSF1-205ENST00000582730 ZSWIM7Q19AV6 140 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
SRSF1-205ENST00000582730 ARHGAP40Q5TG30 622 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 HLA-DQA1Q5Y7H0 255 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 LINC00114Q6XXX2 140 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 TIGD4Q8IY51 512 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 SOSTQ9BQB4 213 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 GNG8Q9UK08 70 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 NUP50Q9UKX7 468 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 CLEC4AQ9UMR7 237 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 ZNF337Q9Y3M9 751 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 PCDHGB7Q9Y5F8 929 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 C4orf47A7E2U8 309 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 C17orf51A8MQB3 221 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 INMT-MINDY4F8WBC2 141 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 DUX1O43812 170 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 SELENOFO60613 162 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 SLC22A5O76082 557 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 KLHL26Q53HC5 615 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 APOOLQ6UXV4 268 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 NR2C2APQ86WQ0 139 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 OR1L3Q8NH93 324 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 SLC2A12Q8TD20 617 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 GHSRQ92847 366 aa12.49□□□□□ -0.41
SRSF1-205ENST00000582730 TMEM43Q9BTV4 400 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms