RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 SGCBQ16585 318 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 TMEM176BQ3YBM2 270 aaPredicted RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 FAM174BQ3ZCQ3 159 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 KLHL26Q53HC5 615 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 HHATQ5VTY9 493 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 HBMQ6B0K9 141 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 TYW3Q6IPR3 259 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 PAMR1Q6UXH9 720 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 SPNS3Q6ZMD2 512 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 FRRS1Q6ZNA5 592 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 CHMP1BQ7LBR1 199 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 R3HCC1LQ7Z5L2 792 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 AMIGO2Q86SJ2 522 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 RNF130Q86XS8 419 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 CIARTQ8N365 385 aaPredicted RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 GTPBP8Q8N3Z3 284 aaPredicted RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 ZNF527Q8NB42 609 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 GOT1L1Q8NHS2 421 aaPredicted RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 PSMA8Q8TAA3 256 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 RAB3IL1Q8TBN0 382 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 SFXN5Q8TD22 340 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 XAGE5Q8WWM1 108 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.52□□□□□ -1.85
DDX42-211ENST00000580108 OSTF1Q92882 214 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 MTERF3Q96E29 417 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 THOC1Q96FV9 657 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 AURKBQ96GD4 344 aaPredicted RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 METTL2AQ96IZ6 378 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 KLHL15Q96M94 604 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 ZNF300Q96RE9 604 aaPredicted RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 SDF2Q99470 211 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 SLC35A5Q9BS91 424 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 MED18Q9BUE0 208 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 THUMPD3Q9BV44 507 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 RSPO3Q9BXY4 272 aaPredicted RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 PRRG4Q9BZD6 226 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 PTGES2Q9H7Z7 377 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 RNF122Q9H9V4 155 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 EML4Q9HC35 981 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 SDHAF3Q9NRP4 125 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 UBQLN4Q9NRR5 601 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 AIG1Q9NVV5 245 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 ICAM5Q9UMF0 924 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 FAF1Q9UNN5 650 aaPredicted RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 PROCRQ9UNN8 238 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 EIF3LQ9Y262 564 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 WBP11Q9Y2W2 641 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 TMED5Q9Y3A6 229 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 MRPS18CQ9Y3D5 142 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 RAP2CQ9Y3L5 183 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 AP4B1Q9Y6B7 739 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 NSD1Q96L73 2696 aaPredicted RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 ALPK2Q86TB3 2170 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 FN1P02751 2386 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 HEATR1Q9H583 2144 aaKnown RBP3.52□□□□□ -1.85
DDX42-211ENST00000580108 PLCE1Q9P212 2302 aa3.52□□□□□ -1.85
DDX42-211ENST00000580108 A0A1W2PQD3 144 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 A0A1W2PR80 420 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 TMEM72A0PK05 275 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 TRIM64A6NGJ6 449 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 SERINC4A6NH21 518 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 TRIM64BA6NI03 449 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 CCDC154A6NI56 674 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 GTPBP1O00178 669 aaKnown RBP3.51□□□□□ -1.85
DDX42-211ENST00000580108 HMGN4O00479 90 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 SMAD9O15198 467 aaKnown RBP3.51□□□□□ -1.85
DDX42-211ENST00000580108 ADAMDEC1O15204 470 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 BIRC5O15392 142 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 FRS3O43559 492 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 KIAA0513O60268 411 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 SS18L1O75177 396 aaPredicted RBP3.51□□□□□ -1.85
DDX42-211ENST00000580108 SNNO75324 88 aaPredicted RBP3.51□□□□□ -1.85
DDX42-211ENST00000580108 GCM2O75603 506 aaPredicted RBP3.51□□□□□ -1.85
DDX42-211ENST00000580108 SYNGR4O95473 234 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 CSTAP01040 98 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 IGHV3-9P01782 118 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 RAF1P04049 648 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 FESP07332 822 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 TUBBP07437 444 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 NGFRP08138 427 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 IFI6P09912 130 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 MYZAPP0CAP1 466 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 GKN3PP0CG01 181 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 UBL4AP11441 157 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 PRG2P13727 222 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 ETFAP13804 333 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 HPGDP15428 266 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 LBPP18428 481 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 PRPS1L1P21108 318 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 ATP6V1C1P21283 382 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 CRYGSP22914 178 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 DNASE1P24855 282 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 S100A3P33764 101 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 CHI3L1P36222 383 aaPredicted RBP3.51□□□□□ -1.85
DDX42-211ENST00000580108 UGT2B10P36537 528 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 P2RX1P51575 399 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 ATP12AP54707 1039 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 PSMD4P55036 377 aaKnown RBP3.51□□□□□ -1.85
DDX42-211ENST00000580108 CTBP2P56545 445 aa3.51□□□□□ -1.85
DDX42-211ENST00000580108 HOXC5Q00444 222 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms