RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 SLC30A4O14863 429 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 DDOSTP39656 456 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 RBM34P42696 430 aaKnown RBP18.42■□□□□ 0.54
SMG8-203ENST00000578922 SF3B4Q15427 424 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMG8-203ENST00000578922 TMEM44Q2T9K0 475 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 LINC00114Q6XXX2 140 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 IMMP1LQ96LU5 166 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 PLEKHB1Q9UF11 243 aaPredicted RBP18.42■□□□□ 0.54
SMG8-203ENST00000578922 GSTK1Q9Y2Q3 226 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 RBMX2Q9Y388 322 aaKnown RBP18.42■□□□□ 0.54
SMG8-203ENST00000578922 NSG1A0A0A6YYJ2 146 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 FAM172BPA6NC97 362 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 ELOA3DA6NLF2 546 aaPredicted RBP18.42■□□□□ 0.54
SMG8-203ENST00000578922 TNFSF15O95150 251 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 FGF9P31371 208 aaPredicted RBP18.42■□□□□ 0.54
SMG8-203ENST00000578922 NR4A2P43354 598 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 FXYD6P3P58550 94 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 IFITM2Q01629 132 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 EFR3AQ14156 821 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 ELOA3BQ3SY89 546 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 FAM131AQ6UXB0 335 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 ELOA3Q8NG57 546 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 CAPSLQ8WWF8 208 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 UFD1Q92890 307 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 SPRY4Q9C004 299 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 OR52D1Q9H346 318 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 TPK1Q9H3S4 243 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 ABCB9Q9NP78 766 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 FARSAQ9Y285 508 aaKnown RBP18.42■□□□□ 0.54
SMG8-203ENST00000578922 TMEM5Q9Y2B1 443 aa18.42■□□□□ 0.54
SMG8-203ENST00000578922 A0A1W2PQ09 198 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 WISP1O95388 367 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 GAAP10253 952 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 MTNR1AP48039 350 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 CTBP2P56545 445 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 HNRNPA0Q13151 305 aaKnown RBP18.41■□□□□ 0.54
SMG8-203ENST00000578922 EIF3IQ13347 325 aaKnown RBP18.41■□□□□ 0.54
SMG8-203ENST00000578922 TMPRSS11FQ6ZWK6 438 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 RNFT2Q96EX2 444 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 RASL10BQ96S79 203 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 COQ7Q99807 217 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 ICAM5Q9UMF0 924 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 SF3B6Q9Y3B4 125 aaKnown RBP18.41■□□□□ 0.54
SMG8-203ENST00000578922 PCNX3Q9H6A9 2034 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 ZNF292O60281 2723 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 FABP12A6NFH5 140 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 KDM4EB2RXH2 506 aaPredicted RBP18.41■□□□□ 0.54
SMG8-203ENST00000578922 IDH3BO43837 385 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 CDC40O60508 579 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMG8-203ENST00000578922 FTH1P19P0C7X4 201 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 TACR3P29371 465 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 GABRA5P31644 462 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 NKX2-5P52952 324 aaPredicted RBP18.41■□□□□ 0.54
SMG8-203ENST00000578922 ZMAT1Q5H9K5 638 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 ATAD3CQ5T2N8 411 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 C22orf42Q6IC83 251 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 LRRC17Q8N6Y2 441 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 OR10G3Q8NGC4 313 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 HGDQ93099 445 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 RELTQ969Z4 430 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 DNAJA3Q96EY1 480 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 NEDD4LQ96PU5 975 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 MIXL1Q9H2W2 232 aa18.41■□□□□ 0.54
SMG8-203ENST00000578922 TP63Q9H3D4 680 aaPredicted RBP18.41■□□□□ 0.54
SMG8-203ENST00000578922 A0A1W2PQL4 384 aaPredicted RBP18.4■□□□□ 0.54
SMG8-203ENST00000578922 HMX3A6NHT5 357 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 ITGA10O75578 1167 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 MXD1Q05195 221 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 EXT1Q16394 746 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 CD200R1LQ6Q8B3 271 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 THSD4Q6ZMP0 1018 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 NDUFAF7Q7L592 441 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 PPP1R32Q7Z5V6 425 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 ATG4DQ86TL0 474 aaPredicted RBP18.4■□□□□ 0.54
SMG8-203ENST00000578922 OAFQ86UD1 273 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 SLC22A8Q8TCC7 542 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 RFKQ969G6 155 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 TEX12Q9BXU0 123 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 N6AMT1Q9Y5N5 214 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 EXPH5Q8NEV8 1989 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 FAM47E-STBD1D6RA91 191 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 ADAM10O14672 748 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 EIF4E2O60573 245 aaKnown RBP18.4■□□□□ 0.54
SMG8-203ENST00000578922 SLC2A10O95528 541 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 F8A1P23610 371 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 SLC1A3P43003 542 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 SLC6A8P48029 635 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 RPS15P62841 145 aaKnown RBP18.4■□□□□ 0.54
SMG8-203ENST00000578922 PGGHGQ32M88 737 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 ZNF362Q5T0B9 420 aaPredicted RBP18.4■□□□□ 0.54
SMG8-203ENST00000578922 NXNL2Q5VZ03 156 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 SMARCD3Q6STE5 483 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 LYPD8Q6UX82 237 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 GLRX5Q86SX6 157 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 ANKK1Q8NFD2 765 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 OR2T33Q8NG76 320 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 OR5W2Q8NH69 310 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 C1GALT1C1Q96EU7 318 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 DIRAS2Q96HU8 199 aa18.4■□□□□ 0.54
SMG8-203ENST00000578922 TNFRSF13CQ96RJ3 184 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms