RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 PRSS27Q9BQR3 290 aa13.9□□□□□ -0.18
NCBP3-207ENST00000577169 AMBRA1Q9C0C7 1298 aa13.9□□□□□ -0.18
NCBP3-207ENST00000577169 SEC14L4Q9UDX3 406 aa13.9□□□□□ -0.18
NCBP3-207ENST00000577169 RASD1Q9Y272 281 aa13.9□□□□□ -0.18
NCBP3-207ENST00000577169 GPR52Q9Y2T5 361 aa13.9□□□□□ -0.18
NCBP3-207ENST00000577169 LRRN3E7EW58 273 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 M0R082 166 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 CASKO14936 926 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 FZD7O75084 574 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 VAMP5O95183 116 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 IGHV3-9P01782 118 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 HSD17B1P14061 328 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 CCKARP32238 428 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 TAS2R41P59536 307 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 SFRP5Q5T4F7 317 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 CREB3L2Q70SY1 520 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 FKBP9P1Q75LS8 142 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 H1FNTQ75WM6 255 aaPredicted RBP13.89□□□□□ -0.19
NCBP3-207ENST00000577169 NKAIN4Q8IVV8 208 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 C10orf53Q8N6V4 93 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 ZNF417Q8TAU3 575 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 APH1AQ96BI3 265 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 MPP4Q96JB8 637 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 ZNF385AQ96PM9 386 aaKnown RBP13.89□□□□□ -0.19
NCBP3-207ENST00000577169 ZNF587Q96SQ5 575 aaPredicted RBP13.89□□□□□ -0.19
NCBP3-207ENST00000577169 HDHD5Q9BXW7 423 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 PARPBPQ9NWS1 579 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 NDE1Q9NXR1 346 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 C6orf203Q9P0P8 240 aaPredicted RBP13.89□□□□□ -0.19
NCBP3-207ENST00000577169 TESMINQ9Y4I5 508 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 SNX13Q9Y5W8 968 aa13.89□□□□□ -0.19
NCBP3-207ENST00000577169 SETXQ7Z333 2677 aaKnown RBP13.88□□□□□ -0.19
NCBP3-207ENST00000577169 FAM221AA4D161 298 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 A6NNC1 897 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 MS4A18H0YCH9 400 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 GMNNO75496 209 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 CTAG2O75638 210 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 OR5F1O95221 314 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 PSMB1P20618 241 aaKnown RBP13.88□□□□□ -0.19
NCBP3-207ENST00000577169 YAP1P46937 504 aaKnown RBP13.88□□□□□ -0.19
NCBP3-207ENST00000577169 MFSD13AQ14CX5 517 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 MS4A18Q3C1V0 323 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 IFI44LQ53G44 452 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 SAMD4BQ5PRF9 694 aaKnown RBP13.88□□□□□ -0.19
NCBP3-207ENST00000577169 FBXW9Q5XUX1 488 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 RINLQ6ZS11 566 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 Q6ZT83 130 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 AAED1Q7RTV5 226 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 UBE2J2Q8N2K1 259 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 RBM15BQ8NDT2 890 aaKnown RBP13.88□□□□□ -0.19
NCBP3-207ENST00000577169 ZC3HAV1LQ96H79 300 aaKnown RBP13.88□□□□□ -0.19
NCBP3-207ENST00000577169 OXGR1Q96P68 337 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 MOGAT1Q96PD6 335 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 MED18Q9BUE0 208 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 POLR2J2Q9GZM3 115 aaKnown RBP13.88□□□□□ -0.19
NCBP3-207ENST00000577169 POLR2J3Q9H1A7 115 aaKnown RBP13.88□□□□□ -0.19
NCBP3-207ENST00000577169 A4GNTQ9UNA3 340 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 B3GALT5Q9Y2C3 310 aa13.88□□□□□ -0.19
NCBP3-207ENST00000577169 J3KTA2 159 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 CALB2P22676 271 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 ITGADQ13349 1161 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 P2RY6Q15077 328 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 CASP12Q6UXS9 341 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 TMEM200AQ86VY9 491 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 EPHX4Q8IUS5 362 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 STEAP2Q8NFT2 490 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 TMEM45BQ96B21 275 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 HSH2DQ96JZ2 352 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 LURAP1Q96LR2 239 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 ZNF426Q9BUY5 554 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 ASPNQ9BXN1 380 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 ACTR6Q9GZN1 396 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 GORASP2Q9H8Y8 452 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 RASSF1Q9NS23 344 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 DCAF13Q9NV06 445 aaKnown RBP13.87□□□□□ -0.19
NCBP3-207ENST00000577169 RPS6KA6Q9UK32 745 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 CORINQ9Y5Q5 1042 aa13.87□□□□□ -0.19
NCBP3-207ENST00000577169 KPNA4O00629 521 aaPredicted RBP13.86□□□□□ -0.19
NCBP3-207ENST00000577169 LYZL6O75951 148 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 CNOT4O95628 575 aaKnown RBP13.86□□□□□ -0.19
NCBP3-207ENST00000577169 CH25HO95992 272 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 IFNW1P05000 195 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 THBDP07204 575 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 THRBP10828 461 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 NQO1P15559 274 aaKnown RBP13.86□□□□□ -0.19
NCBP3-207ENST00000577169 PPP3CBP16298 524 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 ZNF43P17038 809 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 FUT4P22083 530 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 IGHV1-2P23083 117 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 FOXG1P55316 489 aaPredicted RBP13.86□□□□□ -0.19
NCBP3-207ENST00000577169 IL1RL1Q01638 556 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 ST3GAL3Q11203 375 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 FAPQ12884 760 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 PMS2P3Q13401 168 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 C1DQ13901 141 aaKnown RBP13.86□□□□□ -0.19
NCBP3-207ENST00000577169 POU4F3Q15319 338 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 FXNQ16595 210 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 TSPO2Q5TGU0 170 aa13.86□□□□□ -0.19
NCBP3-207ENST00000577169 BHLHA15Q7RTS1 189 aaPredicted RBP13.86□□□□□ -0.19
NCBP3-207ENST00000577169 TRPM8Q7Z2W7 1104 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms