RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 BNIP2Q12982 314 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 PGS1Q32NB8 556 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 C3orf36Q3SXR2 165 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 CCDC153Q494R4 210 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 C6orf136Q5SQH8 315 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 OR4F3Q6IEY1 312 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 NIPAL3Q6P499 406 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 TNFAIP8L2Q6P589 184 aaPredicted RBP8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 FRRS1Q6ZNA5 592 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ZCCHC23Q6ZST2 131 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 CREB3L2Q70SY1 520 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ABHD12BQ7Z5M8 362 aaPredicted RBP8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 EPHX4Q8IUS5 362 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 RIMKLAQ8IXN7 391 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 KDM8Q8N371 416 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ZDHHC22Q8N966 263 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 NOA1Q8NC60 698 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 AGR3Q8TD06 166 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 YIPF5Q969M3 257 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ROPN1LQ96C74 230 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 PPP3R2Q96LZ3 170 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 PRPF18Q99633 342 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ZNF747Q9BV97 191 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 MRPL37Q9BZE1 423 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 ESM1Q9NQ30 184 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 REV1Q9UBZ9 1251 aa8.71□□□□□ -1.02
NPLOC4-220ENST00000576940 RNF103-CHMP3A0A140T963 221 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 AQP7P3A6NL99 342 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 ATP8B1O43520 1251 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 CPSF4O95639 269 aaKnown RBP8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 GPIP06744 558 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 SAGP10523 405 aaPredicted RBP8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 ADRA2CP18825 462 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 PAX7P23759 505 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 MAPK1P28482 360 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 CRHR1P34998 444 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 ALDH3B1P43353 468 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 LIMS1P48059 325 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 P2RY4P51582 365 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 LMO4P61968 165 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 ROR2Q01974 943 aaKnown RBP8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 NPRL3Q12980 569 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 SCGB2A2Q13296 93 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 SNTB2Q13425 540 aaKnown RBP8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 DAG1Q14118 895 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 FAM153CQ494X1 144 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 FAM169BQ8N8A8 192 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 FNDC5Q8NAU1 212 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 OR51F2Q8NH61 342 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 MAGEE2Q8TD90 523 aaPredicted RBP8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 C22orf15Q8WYQ4 148 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 ZNF837Q96EG3 531 aaPredicted RBP8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 PKNOX2Q96KN3 472 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 JMJD8Q96S16 334 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 SLC6A7Q99884 636 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 NOX3Q9HBY0 568 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 CRLF2Q9HC73 371 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 EXOSC3Q9NQT5 275 aaKnown RBP8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 ADPRHL2Q9NX46 363 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 PSMC3IPQ9P2W1 217 aaPredicted RBP8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 CMAHPQ9Y471 501 aa8.7□□□□□ -1.02
NPLOC4-220ENST00000576940 PPIHO43447 177 aaKnown RBP8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 TRIM13O60858 407 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 PNPP00491 289 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 GUSBP08236 651 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 ARAFP10398 606 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 G6PDP11413 515 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 HOXB1P14653 301 aaPredicted RBP8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 PRPS1L1P21108 318 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 CXCR1P25024 350 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 TMEM33P57088 247 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 MYBPC1Q00872 1141 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 PCLAFQ15004 111 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 MAD2L1BPQ15013 274 aaPredicted RBP8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 SLC9B1Q4ZJI4 515 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 GPAT3Q53EU6 434 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 XKR7Q5GH72 579 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 ATAD3BQ5T9A4 648 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 MDP1Q86V88 176 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 LRP11Q86VZ4 500 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 ANKRD46Q86W74 232 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 OR4A15Q8NGL6 344 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 MIPOL1Q8TD10 442 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 RDH5Q92781 318 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 MRPL24Q96A35 216 aaKnown RBP8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 SYT3Q9BQG1 590 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 C1QTNF5Q9BXJ0 243 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 TMPRSS13Q9BYE2 586 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 MS4A5Q9H3V2 200 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 PIF1Q9H611 641 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 G6PC2Q9NQR9 355 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 ZNF275Q9NSD4 429 aaPredicted RBP8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 ARGLU1Q9NWB6 273 aaPredicted RBP8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 FZR1Q9UM11 496 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 PPIAL4AQ9Y536 164 aa8.69□□□□□ -1.02
NPLOC4-220ENST00000576940 TRAV20A0A0B4J274 112 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 CFAP73A6NFT4 308 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 M0R233 179 aa8.68□□□□□ -1.02
NPLOC4-220ENST00000576940 PLPP2O43688 288 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms