RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 IL18BPO95998 194 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 CST1P01037 141 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 LDLRP01130 860 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 HIST1H2ABP04908 130 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 IFI30P13284 250 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 AGAP20933 346 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 OPRM1P35372 400 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 ACTR3P61158 418 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 FOXF2Q12947 444 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 KPNB1Q14974 876 aaKnown RBP12.47□□□□□ -0.41
RPAIN-217ENST00000575711 PDK3Q15120 406 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 TMEM201Q5SNT2 666 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 TMEM225Q6GV28 225 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 OR2T5Q6IEZ7 315 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 XKRXQ6PP77 449 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 TBPL2Q6SJ96 375 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 H1FNTQ75WM6 255 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-217ENST00000575711 FAM214BQ7L5A3 538 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 HIST3H2AQ7L7L0 130 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 MRGPRGQ86SM5 289 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 CCDC71Q8IV32 467 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-217ENST00000575711 NRMQ8IXM6 262 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 CDK20Q8IZL9 346 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 ZNF808Q8N4W9 903 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-217ENST00000575711 CNEP1R1Q8N9A8 125 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 SCAIQ8N9R8 606 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 PAPD5Q8NDF8 572 aaKnown RBP12.47□□□□□ -0.41
RPAIN-217ENST00000575711 OR2T29Q8NH02 315 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 ZNF417Q8TAU3 575 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 HIST1H2ACQ93077 130 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 SLCO4A1Q96BD0 722 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 BPIFA2Q96DR5 249 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 ALPK1Q96QP1 1244 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 ZNF587Q96SQ5 575 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-217ENST00000575711 PSD2Q9BQI7 771 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 CHST11Q9NPF2 352 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 C20orf141Q9NUB4 165 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 MRPL39Q9NYK5 338 aaKnown RBP12.47□□□□□ -0.41
RPAIN-217ENST00000575711 EMC3Q9P0I2 261 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 KLHL13Q9P2N7 655 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 ZNF629Q9UEG4 869 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-217ENST00000575711 ZNF229Q9UJW7 825 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 RASD1Q9Y272 281 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 B3GALT5Q9Y2C3 310 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 EMC9Q9Y3B6 208 aa12.47□□□□□ -0.41
RPAIN-217ENST00000575711 RP1L1Q8IWN7 2480 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-217ENST00000575711 A0A1W2PNV4 684 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 SH3PXD2BA1X283 911 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 GNGT2O14610 69 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 RAMP1O60894 148 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 OR7A10O76100 309 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 YES1P07947 543 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 FUT1P19526 365 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 BMP5P22003 454 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 SLC16A1P53985 500 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 SIRPAP78324 504 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.41
RPAIN-217ENST00000575711 IL1RL1Q01638 556 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 PRKCDQ05655 676 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.41
RPAIN-217ENST00000575711 PMS2P3Q13401 168 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 SLC46A3Q7Z3Q1 461 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 GPAT4Q86UL3 456 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 TUSC5Q8IXB3 177 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 C10orf67Q8IYJ2 551 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 ADPRHL1Q8NDY3 354 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 OR4K5Q8NGD3 323 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 OR5J2Q8NH18 312 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 SSC4DQ8WTU2 575 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 CA5BP1Q8WTZ4 195 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 ITLN2Q8WWU7 325 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-217ENST00000575711 SF3B5Q9BWJ5 86 aaKnown RBP12.46□□□□□ -0.41
RPAIN-217ENST00000575711 BCO1Q9HAY6 547 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 SEC14L4Q9UDX3 406 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 TMEM5Q9Y2B1 443 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 SAMHD1Q9Y3Z3 626 aaKnown RBP12.46□□□□□ -0.41
RPAIN-217ENST00000575711 LYVE1Q9Y5Y7 322 aa12.46□□□□□ -0.41
RPAIN-217ENST00000575711 KIAA1549Q9HCM3 1950 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 IGKV3D-15A0A087WSY6 115 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 CLEC18AA5D8T8 446 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 ZNF716A6NP11 495 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 ZNF724A8MTY0 619 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 GPR171O14626 319 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 TNFSF13O75888 250 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 OR6A2O95222 327 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 ASAH2BP0C7U1 165 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 SAGP10523 405 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-217ENST00000575711 AGTR1P30556 359 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 IFNGR2P38484 337 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 KIR2DL2P43627 348 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-217ENST00000575711 P2RY4P51582 365 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 HMGA2P52926 109 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 GK3PQ14409 553 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 SLC17A1Q14916 467 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 SEC23BQ15437 767 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 GUSBP1Q15486 140 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 EXOC3L2Q2M3D2 409 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 VWA1Q6PCB0 445 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 CLEC18BQ6UXF7 455 aa12.45□□□□□ -0.42
RPAIN-217ENST00000575711 NANOGNBQ7Z5D8 188 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms