RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 OTUD3Q5T2D3 398 aaPredicted RBP7.64□□□□□ -1.19
SMG6-216ENST00000575176 TSPO2Q5TGU0 170 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ZNF613Q6PF04 617 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ULK3Q6PHR2 472 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 BEND4Q6ZU67 534 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 CREB3L2Q70SY1 520 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 GALNT5Q7Z7M9 940 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 SLC30A8Q8IWU4 369 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 MICU2Q8IYU8 434 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 FAM86B1Q8N7N1 296 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 RBM15BQ8NDT2 890 aaKnown RBP7.64□□□□□ -1.19
SMG6-216ENST00000575176 BHLHE22Q8NFJ8 381 aaPredicted RBP7.64□□□□□ -1.19
SMG6-216ENST00000575176 OR52E4Q8NGH9 312 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 OR6S1Q8NH40 331 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ZNF417Q8TAU3 575 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ADAMTS16Q8TE57 1224 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ZNF607Q96SK3 696 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ZNF587Q96SQ5 575 aaPredicted RBP7.64□□□□□ -1.19
SMG6-216ENST00000575176 SF3B5Q9BWJ5 86 aaKnown RBP7.64□□□□□ -1.19
SMG6-216ENST00000575176 POLDIP3Q9BY77 421 aaKnown RBP7.64□□□□□ -1.19
SMG6-216ENST00000575176 TRIM2Q9C040 744 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ARL8BQ9NVJ2 186 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 ZNF232Q9UNY5 417 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 GPR52Q9Y2T5 361 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 SNX13Q9Y5W8 968 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 CUBNO60494 3623 aa7.64□□□□□ -1.19
SMG6-216ENST00000575176 NIPBLQ6KC79 2804 aaeCLIP7.64□□□□□ -1.19
SMG6-216ENST00000575176 ARID1AO14497 2285 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 TRAV36DV7A0A075B6V5 113 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 LOC102725191A0A1B0GVB3 256 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 GMNCA6NCL1 334 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 ZNF503-AS2A6NEH8 195 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 CPSF4LA6NMK7 179 aaKnown RBP7.63□□□□□ -1.19
SMG6-216ENST00000575176 MS4A18H0YCH9 400 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 FFAR1O14842 300 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 EIF1BO60739 113 aaKnown RBP7.63□□□□□ -1.19
SMG6-216ENST00000575176 CCDC22O60826 627 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 SERPINB7O75635 380 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 LYZL6O75951 148 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 SEMG1P04279 462 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 GPIP06744 558 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 CXCR1P25024 350 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 PRDX6P30041 224 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 GRPRP30550 384 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 KDELR2P33947 212 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 SELENOPP49908 381 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 NUDT2P50583 147 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 IST1P53990 364 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 UGT2B15P54855 530 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 COPZ1P61923 177 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 LIPEQ05469 1076 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 ITGADQ13349 1161 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 P2RY6Q15077 328 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 GABRA6Q16445 453 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 MS4A18Q3C1V0 323 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 CYBRD1Q53TN4 286 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 PHYHD1Q5SRE7 291 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 FAM69AQ5T7M9 428 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 FBXW9Q5XUX1 488 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 ERICH5Q6P6B1 374 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 SPNS3Q6ZMD2 512 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 VTCN1Q7Z7D3 282 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 CARM1Q86X55 608 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 KDM8Q8N371 416 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 ANKS4BQ8N8V4 417 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 WDR31Q8NA23 367 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 OR2T12Q8NG77 320 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 VANGL1Q8TAA9 524 aaPredicted RBP7.63□□□□□ -1.19
SMG6-216ENST00000575176 DNAJA4Q8WW22 397 aaPredicted RBP7.63□□□□□ -1.19
SMG6-216ENST00000575176 NINJ1Q92982 152 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 MBD6Q96DN6 1003 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 LRRC46Q96FV0 321 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 MCHR1Q99705 422 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 MED18Q9BUE0 208 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 KLHL4Q9C0H6 718 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 ALG2Q9H553 416 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 EVA1AQ9H8M9 152 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 ADPRHL2Q9NX46 363 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 EMC3Q9P0I2 261 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 A4GNTQ9UNA3 340 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 SLC9A8Q9Y2E8 581 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 SLC25A15Q9Y619 301 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 ABCA2Q9BZC7 2435 aa7.63□□□□□ -1.19
SMG6-216ENST00000575176 TLN2Q9Y4G6 2542 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ELOVL7A1L3X0 281 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 OR5H1A6NKK0 313 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ELOA3DA6NLF2 546 aaPredicted RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 GPR171O14626 319 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 AIM2O14862 343 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 UPK3AO75631 287 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 AHSA1O95433 338 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ASAH2BP0C7U1 165 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 PPP3CBP16298 524 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 GGT1P19440 569 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 OR1E2P47887 323 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 SPOCK1Q08629 439 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ZNF74Q16587 644 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 ELOA3BQ3SY89 546 aa7.62□□□□□ -1.19
SMG6-216ENST00000575176 INTS11Q5TA45 600 aaKnown RBP7.62□□□□□ -1.19
SMG6-216ENST00000575176 GTF2IRD2BQ6EKJ0 949 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms