RNA–Protein interactions for RNA: ENST00000574653.1

TOM1L1-218, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-218ENST00000574653 KRTAP4-16G5E9R7 235 aaPredicted RBP3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 NCF2P19878 526 aaPredicted RBP3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 CD1CP29017 333 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 RDXP35241 583 aaKnown RBP3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 KPNA2P52292 529 aaKnown RBP3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 HERPUD1Q15011 391 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 TIGD3Q6B0B8 471 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 SLC26A11Q86WA9 606 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 CDR2LQ86X02 465 aaPredicted RBP3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 ECHDC2Q86YB7 292 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 TGIF2LXQ8IUE1 241 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 ERI1Q8IV48 349 aaKnown RBP3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 SLC22A9Q8IVM8 553 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 C11orf53Q8IXP5 236 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 RNF139Q8WU17 664 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 MARC2Q969Z3 335 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 TUBGCP3Q96CW5 907 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 TM4SF19Q96DZ7 209 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 PHYHIPLQ96FC7 376 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 ITCHQ96J02 903 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 ZNF641Q96N77 438 aaPredicted RBP3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 FMO2Q99518 471 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 P2RY13Q9BPV8 354 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 PPA2Q9H2U2 334 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 AIG1Q9NVV5 245 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 ZNF256Q9Y2P7 627 aaPredicted RBP3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 PEX16Q9Y5Y5 336 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 CDH10Q9Y6N8 788 aa3.42□□□□□ -1.86
TOM1L1-218ENST00000574653 PPIAL4EA0A075B759 164 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 NSG1A0A0A6YYJ2 146 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 OR5B21A6NL26 309 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 E9PBE3 544 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 GOLGA8SH3BPF8 625 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 AP3B1O00203 1094 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 EMC8O43402 210 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 PPIAL4FP0DN26 164 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 SLC2A3P11169 496 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 FUT3P21217 361 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 GSSP48637 474 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 TPMTP51580 245 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 SELENOTP62341 195 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 TGFBR3Q03167 851 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 SCRN3Q0VDG4 424 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 PPIL2Q13356 520 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 IMMTQ16891 758 aaKnown RBP3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 PRAMEF5Q5TYX0 476 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 PRAMEF6Q5VXH4 476 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 NUDCD3Q8IVD9 361 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 PIANPQ8IYJ0 282 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 UBE2J2Q8N2K1 259 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 SDR9C7Q8NEX9 313 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 OR2L3Q8NG85 312 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 OR9K2Q8NGE7 335 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 RPUSD4Q96CM3 377 aaKnown RBP3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 TPD52L3Q96J77 140 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 IMMP1LQ96LU5 166 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 PANX2Q96RD6 677 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 CNN2Q99439 309 aaKnown RBP3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 TSG101Q99816 390 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 FAIM2Q9BWQ8 316 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 RNF167Q9H6Y7 350 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 ZFP14Q9HCL3 533 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 ASF1AQ9Y294 204 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 ARHGAP23Q9P227 1491 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 RIMBP3CA6NJZ7 1639 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 RIMBP3BA6NNM3 1639 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 RIMBP3Q9UFD9 1639 aa3.41□□□□□ -1.86
TOM1L1-218ENST00000574653 A0A0G2JLM5 398 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 UPK3AO75631 287 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 BBOX1O75936 387 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 SUPT7LO94864 414 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 KLK3P07288 261 aaPredicted RBP3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 UQCRFS1P1P0C7P4 283 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 GABRR1P24046 479 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 RBMXP38159 391 aaKnown RBP3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 VHLP40337 213 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 SSR1P43307 286 aaKnown RBP3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 GYG1P46976 350 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 CAV2P51636 162 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 GPM6AP51674 278 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 DLX1P56177 255 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 TLE4Q04727 773 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 GNMTQ14749 295 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 GPNMBQ14956 572 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 KCTD21Q4G0X4 260 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 CCDC183Q5T5S1 534 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 C1orf94Q6P1W5 598 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 TAS2R42Q7RTR8 314 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 PRR22Q8IZ63 422 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 TPRX1Q8N7U7 411 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 NECAB1Q8N987 351 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 ZNF740Q8NDX6 193 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 OR2L5Q8NG80 312 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 OR1L6Q8NGR2 347 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 AKR7LQ8NHP1 331 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 DCUN1D4Q92564 292 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 TMEM101Q96IK0 257 aa3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 POLR2J2Q9GZM3 115 aaKnown RBP3.4□□□□□ -1.87
TOM1L1-218ENST00000574653 POLR2J3Q9H1A7 115 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms