RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TMEM71Q6P5X7 295 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 UNQ9370/PRO34162Q6UXP9 181 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 CCDC36Q8IYA8 594 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 SPAG16Q8N0X2 631 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 BEST3Q8N1M1 668 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 SFXN5Q8TD22 340 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 ADAMTS15Q8TE58 950 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 VRK1Q99986 396 aaPredicted RBP13.23□□□□□ -0.29
SMG6-215ENST00000574501 ZNF559Q9BR84 538 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 VN1R3Q9BXE9 311 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 MFRPQ9BY79 579 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 FAM117AQ9C073 453 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 MDC1Q14676 2089 aaKnown RBP13.23□□□□□ -0.29
SMG6-215ENST00000574501 HEATR5BQ9P2D3 2071 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 OR6C76A6NM76 312 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 ADAMTS4O75173 837 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 RAB40ALP0C0E4 278 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 GTF2F2P13984 249 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 NDUFS1P28331 727 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 GRPRP30550 384 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 FAUP35544 74 aaKnown RBP13.23□□□□□ -0.29
SMG6-215ENST00000574501 HAAOP46952 286 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 NPBWR1P48145 328 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
SMG6-215ENST00000574501 MRPS10P82664 201 aaKnown RBP13.23□□□□□ -0.29
SMG6-215ENST00000574501 SLC9A5Q14940 896 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 OR1Q1Q15612 314 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 PAN3Q58A45 887 aaKnown RBP13.23□□□□□ -0.29
SMG6-215ENST00000574501 LY6G6FQ5SQ64 297 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 OR52E2Q8NGJ4 325 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 OR4K13Q8NH42 304 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 RAB40AQ8WXH6 277 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 MIB2Q96AX9 1013 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 TLNRD1Q9H1K6 362 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 POFUT1Q9H488 388 aa13.23□□□□□ -0.29
SMG6-215ENST00000574501 A0A0D9SG52 128 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 TRAPPC13A5PLN9 417 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 LRIT2A6NDA9 550 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 NRG2O14511 850 aaPredicted RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 NFYBP25208 207 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 REEP5Q00765 189 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 SNTB1Q13884 538 aaKnown RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 TAF13Q15543 124 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 MPPED2Q15777 294 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 AVPI1Q5T686 147 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 DHRS7BQ6IAN0 325 aaPredicted RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 RAB12Q6IQ22 244 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 H3F3CQ6NXT2 135 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 TMED4Q7Z7H5 227 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 TMEM25Q86YD3 366 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 SLC22A8Q8TCC7 542 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 DOK4Q8TEW6 326 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 ZNRF4Q8WWF5 429 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 COL26A1Q96A83 441 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 ZNF764Q96H86 408 aaPredicted RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 TNFRSF13CQ96RJ3 184 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 TINAGL1Q9GZM7 467 aaPredicted RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 TMEM231Q9H6L2 316 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 PELI2Q9HAT8 420 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 APMAPQ9HDC9 416 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 SPHK1Q9NYA1 384 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 CALML5Q9NZT1 146 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 LRFN2Q9ULH4 789 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 WDR45Q9Y484 360 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 NPIPA5A0A0B4J1W7 369 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 MEX3AA1L020 520 aaKnown RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 OR5H14A6NHG9 310 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 NPIPA7E9PJI5 369 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 TO15178 435 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 KCNAB3O43448 404 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 CTNSO60931 367 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 GLSO94925 669 aaPredicted RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 CXCL14O95715 111 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 AIFM1O95831 613 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 NPIPA8P0DM63 369 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 CYBAP13498 195 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 SYN1P17600 705 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 PTGFRP43088 359 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 SOX2P48431 317 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 NANOS3P60323 173 aaKnown RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 ACTA2P62736 377 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 ACTG2P63267 376 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 FAM111BQ6SJ93 734 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 KRT77Q7Z794 578 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 SLC35F2Q8IXU6 374 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 OR6N1Q8NGY5 312 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 RGP1Q92546 391 aaPredicted RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 TFGQ92734 400 aaPredicted RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 SEC22AQ96IW7 307 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 BCL2L14Q9BZR8 327 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 HAO2Q9NYQ3 351 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 MKL2Q9ULH7 1088 aa13.22□□□□□ -0.29
SMG6-215ENST00000574501 ABT1Q9ULW3 272 aaKnown RBP13.22□□□□□ -0.29
SMG6-215ENST00000574501 H7C417 338 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 IMPA2O14732 288 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 ERI3O43414 337 aaKnown RBP13.21□□□□□ -0.29
SMG6-215ENST00000574501 ABLIM3O94929 683 aa13.21□□□□□ -0.29
SMG6-215ENST00000574501 ZFPL1O95159 310 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms