RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 AQP4P55087 323 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 POU4F3Q15319 338 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 LRRC36Q1X8D7 754 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 SYT14P1Q58G82 188 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 MRPL2Q5T653 305 aaKnown RBP8.09□□□□□ -1.11
NDE1-207ENST00000573203 BEND4Q6ZU67 534 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 CBLL1Q75N03 491 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 GRINAQ7Z429 371 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 PTOV1Q86YD1 416 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 TUSC5Q8IXB3 177 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 SLC43A2Q8N370 569 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 SVOPLQ8N434 492 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 C11orf65Q8NCR3 313 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 SLC25A43Q8WUT9 341 aaPredicted RBP8.09□□□□□ -1.11
NDE1-207ENST00000573203 WFIKKN1Q96NZ8 548 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 LIME1Q9H400 295 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 CACYBPQ9HB71 228 aaKnown RBP8.09□□□□□ -1.11
NDE1-207ENST00000573203 CTPS2Q9NRF8 586 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 KLHL28Q9NXS3 571 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 ZNF226Q9NYT6 803 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 KLHL13Q9P2N7 655 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 CHRNA9Q9UGM1 479 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 ST6GALNAC2Q9UJ37 374 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 TESMINQ9Y4I5 508 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 AKAP6Q13023 2319 aa8.09□□□□□ -1.11
NDE1-207ENST00000573203 ABCA4P78363 2273 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 C5orf58C9J3I9 102 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 SULT2B1O00204 365 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 AP3D1O14617 1153 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 HPRP00739 348 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 IFNA14P01570 189 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 HRGP04196 525 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 SEMG1P04279 462 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 YES1P07947 543 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 TFPTP0C1Z6 253 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 CCNA2P20248 432 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 DNASE1P24855 282 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 FKBP2P26885 142 aaKnown RBP8.08□□□□□ -1.12
NDE1-207ENST00000573203 CCKARP32238 428 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 HTR3AP46098 478 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 DIO1P49895 249 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 ART1P52961 327 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 IST1P53990 364 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 CSNK2A1P68400 391 aaPredicted RBP8.08□□□□□ -1.12
NDE1-207ENST00000573203 PLAURQ03405 335 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 RASGEF1BQ0VAM2 473 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 GK3PQ14409 553 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 LIN52Q52LA3 116 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
NDE1-207ENST00000573203 ANKRD34AQ69YU3 496 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 TMPPEQ6ZT21 453 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 ZNF550Q7Z398 422 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 NUFIP2Q7Z417 695 aaKnown RBP8.08□□□□□ -1.12
NDE1-207ENST00000573203 AMIGO2Q86SJ2 522 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 VRK2Q86Y07 508 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 ZNF440Q8IYI8 595 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 C10orf111Q8N326 155 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 OR52P1PQ8NH57 321 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 SLC38A5Q8WUX1 472 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 TFAP2CQ92754 450 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 NINJ1Q92982 152 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 FAM162AQ96A26 154 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 ZHX1-C8orf76Q96EF9 292 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 NRBF2Q96F24 287 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 ZC3HAV1LQ96H79 300 aaKnown RBP8.08□□□□□ -1.12
NDE1-207ENST00000573203 TMEM19Q96HH6 336 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 SLC29A1Q99808 456 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 PIF1Q9H611 641 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 NTN4Q9HB63 628 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 GP6Q9HCN6 339 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 IL1RAPQ9NPH3 570 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 USE1Q9NZ43 259 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 KLHL9Q9P2J3 617 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 ZNF232Q9UNY5 417 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 USP22Q9UPT9 525 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 ZNF443Q9Y2A4 671 aaPredicted RBP8.08□□□□□ -1.12
NDE1-207ENST00000573203 PLEKHA6Q9Y2H5 1048 aa8.08□□□□□ -1.12
NDE1-207ENST00000573203 DSPPQ9NZW4 1301 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 TMED7-TICAM2A0A0A6YYA0 188 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 A0A0G2JPF8 293 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 HNRNPCL2B2RXH8 293 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 HNRNPCL3B7ZW38 293 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 H0YAE9 185 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 FAAHO00519 579 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 SMAD9O15198 467 aaKnown RBP8.07□□□□□ -1.12
NDE1-207ENST00000573203 CYTIPO60759 359 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 ADAM11O75078 769 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 SERPINA1P01009 418 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 FESP07332 822 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 HNRNPCL4P0DMR1 293 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 PPP3CBP16298 524 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 CRYGSP22914 178 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
NDE1-207ENST00000573203 SLC1A3P43003 542 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 POLR2HP52434 150 aaKnown RBP8.07□□□□□ -1.12
NDE1-207ENST00000573203 OR2B6P58173 313 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 EPS8Q12929 822 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 LARS2Q15031 903 aaKnown RBP8.07□□□□□ -1.12
NDE1-207ENST00000573203 TESK1Q15569 626 aa8.07□□□□□ -1.12
NDE1-207ENST00000573203 MAPK11Q15759 364 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms