RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 KRT73Q86Y46 540 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 FUNDC1Q8IVP5 155 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 C17orf78Q8N4C9 275 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 TMEM99Q8N816 258 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 POMGNT2Q8NAT1 580 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 C1orf162Q8NEQ5 155 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 NFKBIDQ8NI38 313 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC35B4Q969S0 331 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 C3orf49Q96BT1 292 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 SPATA5L1Q9BVQ7 753 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLCO5A1Q9H2Y9 848 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC7A10Q9NS82 523 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 INTS9Q9NV88 658 aaKnown RBP10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 TMEM45AQ9NWC5 275 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 RPS6KB2Q9UBS0 482 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 POU2F3Q9UKI9 436 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 CORO2BQ9UQ03 480 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 MGAT4BQ9UQ53 548 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 CHST2Q9Y4C5 530 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC25A15Q9Y619 301 aa10.87□□□□□ -0.67
CTDNEP1-205ENST00000570828 DSCAMO60469 2012 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 A0A1W2PR80 420 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ELOA3DA6NLF2 546 aaPredicted RBP10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 TMEM229AB2RXF0 380 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 M0R1B8 84 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 OVOL3O00110 214 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 PDLIM1O00151 329 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 KRT33AO76009 404 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 VAMP5O95183 116 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ARAFP10398 606 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 MPGP29372 298 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 PRKAR1BP31321 381 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ATP4BP51164 291 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 NCALDP61601 193 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 HOXC5Q00444 222 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 GABRA6Q16445 453 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ELOA3BQ3SY89 546 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 PAGE3Q5JUK9 113 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 TMEM225Q6GV28 225 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 REEP3Q6NUK4 255 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC22A25Q6T423 547 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 HDXQ7Z353 690 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ABHD12BQ7Z5M8 362 aaPredicted RBP10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 MSRB3Q8IXL7 192 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 DEPDC4Q8N2C3 294 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ELOA3Q8NG57 546 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 STK35Q8TDR2 534 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 HS6ST2Q96MM7 605 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 MUS81Q96NY9 551 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ZNF385AQ96PM9 386 aaKnown RBP10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 AMBRA1Q9C0C7 1298 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 RABEP2Q9H5N1 569 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 PIF1Q9H611 641 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ARGLU1Q9NWB6 273 aaPredicted RBP10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 VAPAQ9P0L0 249 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLAMF8Q9P0V8 285 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 AMDHD2Q9Y303 409 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ZANQ9Y493 2812 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 ABCA2Q9BZC7 2435 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 FREM1Q5H8C1 2179 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 PRR14LQ5THK1 2151 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 TLN2Q9Y4G6 2542 aa10.86□□□□□ -0.67
CTDNEP1-205ENST00000570828 EVPLLA8MZ36 301 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 NPIPB7O75200 414 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 CDH2P19022 906 aaPredicted RBP10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 CD40P25942 277 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 CDK6Q00534 326 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 SPOCK1Q08629 439 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 SCARB2Q14108 478 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 CLEC12BQ2HXU8 276 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 AGAP6Q5VW22 663 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 DTX2Q86UW9 622 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 ZIC4Q8N9L1 334 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 MFSD8Q8NHS3 518 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC25A36Q96CQ1 311 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 TRAF4Q9BUZ4 470 aaPredicted RBP10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC17A5Q9NRA2 495 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 EGFL7Q9UHF1 273 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC13A4Q9UKG4 626 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 TRIM33Q9UPN9 1127 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 RASD1Q9Y272 281 aa10.85□□□□□ -0.67
CTDNEP1-205ENST00000570828 TRBV5-3A0A0A0MS03 114 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 PRORSD1PA6NEY8 169 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 OR6C65A6NJZ3 312 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 ZNF587BE7ETH6 402 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 WNT11O96014 354 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 PNMTP11086 282 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 SLC6A2P23975 617 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 RPS5P46782 204 aaKnown RBP10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 P2RY4P51582 365 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 PRPS1P60891 318 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 TNK1Q13470 666 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 C1QTNF12Q5T7M4 302 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 DHRS4L2Q6PKH6 230 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 C5orf46Q6UWT4 87 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 C6orf89Q6UWU4 347 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 CREB3L2Q70SY1 520 aa10.84□□□□□ -0.67
CTDNEP1-205ENST00000570828 C10orf111Q8N326 155 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms