RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 KATNB1Q9BVA0 655 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 RAB1BQ9H0U4 201 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 OCEL1Q9H607 264 aa10.45□□□□□ -0.74
CAPN3-220ENST00000569827 PKD1L1Q8TDX9 2849 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 TMEM129A0AVI4 362 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 CCDC154A6NI56 674 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 ADRA2AP08913 450 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 NR2F1P10589 423 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 TCN1P20061 433 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-220ENST00000569827 IL12AP29459 219 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 CHN2P52757 468 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 CLDN17P56750 224 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 UFM1P61960 85 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 ARF1P84077 181 aaKnown RBP10.44□□□□□ -0.74
CAPN3-220ENST00000569827 HOXC5Q00444 222 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 ROR2Q01974 943 aaKnown RBP10.44□□□□□ -0.74
CAPN3-220ENST00000569827 SNTB2Q13425 540 aaKnown RBP10.44□□□□□ -0.74
CAPN3-220ENST00000569827 EFNB3Q15768 340 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 CHI3L2Q15782 390 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 ANXA8L1Q5VT79 327 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 C12orf54Q6X4T0 127 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 MEX3DQ86XN8 651 aaKnown RBP10.44□□□□□ -0.74
CAPN3-220ENST00000569827 CNPY4Q8N129 248 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 RFLNBQ8N5W9 214 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 LINC01356Q8N9X3 169 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 KIF18AQ8NI77 898 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 PMM1Q92871 262 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 SLC25A36Q96CQ1 311 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 TAPBPLQ9BX59 468 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 NUF2Q9BZD4 464 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 ADAM19Q9H013 955 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 METTL17Q9H7H0 456 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-220ENST00000569827 PPCSQ9HAB8 311 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 NOX3Q9HBY0 568 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 DYNLRB1Q9NP97 96 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 MYOZ1Q9NP98 299 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-220ENST00000569827 SLC6A13Q9NSD5 602 aa10.44□□□□□ -0.74
CAPN3-220ENST00000569827 MEGF8Q7Z7M0 2845 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 IGHV2OR16-5A0A0B4J2B6 119 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 OR6C65A6NJZ3 312 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 E9PBE3 544 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 WNT9BO14905 357 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 IGLV1-44P01699 117 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 GUSBP08236 651 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 TACSTD2P09758 323 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 ALDOCP09972 364 aaKnown RBP10.43□□□□□ -0.74
CAPN3-220ENST00000569827 IFNGR1P15260 489 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 NPR2P20594 1047 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 CBLP22681 906 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 FKBP2P26885 142 aaKnown RBP10.43□□□□□ -0.74
CAPN3-220ENST00000569827 GIFP27352 417 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 S100A3P33764 101 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 SERPINB5P36952 375 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 ACAA2P42765 397 aaKnown RBP10.43□□□□□ -0.74
CAPN3-220ENST00000569827 RPS5P46782 204 aaKnown RBP10.43□□□□□ -0.74
CAPN3-220ENST00000569827 CAPZA2P47755 286 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 CDH15P55291 814 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 IL1RL1Q01638 556 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 PHYHD1Q5SRE7 291 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 C1orf140Q5VVS0 124 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 AP1ARQ63HQ0 302 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 LRRC74BQ6ZQY2 392 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 ZNF621Q6ZSS3 439 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 ABHD12BQ7Z5M8 362 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-220ENST00000569827 MDP1Q86V88 176 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 NUDCD3Q8IVD9 361 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 CLIP4Q8N3C7 705 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 CKAP2Q8WWK9 683 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 MS4A3Q96HJ5 214 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 CCDC115Q96NT0 180 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 TRNT1Q96Q11 434 aaKnown RBP10.43□□□□□ -0.74
CAPN3-220ENST00000569827 PANX1Q96RD7 426 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 DOK1Q99704 481 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 SF3B5Q9BWJ5 86 aaKnown RBP10.43□□□□□ -0.74
CAPN3-220ENST00000569827 CRNNQ9UBG3 495 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-220ENST00000569827 FZR1Q9UM11 496 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 CHST2Q9Y4C5 530 aa10.43□□□□□ -0.74
CAPN3-220ENST00000569827 ARPC4-TTLL3A0A0A6YYG9 625 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 CDHR4A6H8M9 788 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 PDE5AO76074 875 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 SNUPNO95149 360 aaKnown RBP10.42□□□□□ -0.74
CAPN3-220ENST00000569827 IGKV3-15P01624 115 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 BCHEP06276 602 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 DBIP07108 87 aaKnown RBP10.42□□□□□ -0.74
CAPN3-220ENST00000569827 PNMTP11086 282 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 NCF2P19878 526 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-220ENST00000569827 ETV4P43268 484 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 ABCE1P61221 599 aaKnown RBP10.42□□□□□ -0.74
CAPN3-220ENST00000569827 RIN1Q13671 783 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 GTDC1Q4AE62 458 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 CARD17Q5XLA6 110 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 SERPINA11Q86U17 422 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 CMIPQ8IY22 773 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 ZNF540Q8NDQ6 660 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 OR52P1PQ8NH57 321 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 UBASH3BQ8TF42 649 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 OIT3Q8WWZ8 545 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 TESCQ96BS2 214 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 SORT1Q99523 831 aa10.42□□□□□ -0.74
CAPN3-220ENST00000569827 OBP2BQ9NPH6 170 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms