RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 ZNF16P17020 682 aaPredicted RBP11.92□□□□□ -0.5
CNOT1-215ENST00000569020 PDLIM4P50479 330 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 DSTNP60981 165 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 MAPK11Q15759 364 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 SWI5Q1ZZU3 235 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 TBRG1Q3YBR2 411 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 PDCD4Q53EL6 469 aaKnown RBP11.92□□□□□ -0.5
CNOT1-215ENST00000569020 RNF220Q5VTB9 566 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 C1orf140Q5VVS0 124 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 PRAMEF8Q5VWM4 474 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 PRAMEF7Q5VXH5 474 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 NXNQ6DKJ4 435 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 NIPAL3Q6P499 406 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 CREB3L2Q70SY1 520 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 ANKRD42Q8N9B4 389 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 OR1K1Q8NGR3 316 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 NANOS1Q8WY41 292 aaKnown RBP11.92□□□□□ -0.5
CNOT1-215ENST00000569020 SLC38A2Q96QD8 506 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 PIMREGQ9BSJ6 248 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 SHARPINQ9H0F6 387 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 RMND5AQ9H871 391 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 TPT1P8Q9HAU6 139 aa11.92□□□□□ -0.5
CNOT1-215ENST00000569020 ZNF443Q9Y2A4 671 aaPredicted RBP11.92□□□□□ -0.5
CNOT1-215ENST00000569020 CUBNO60494 3623 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 FBN1P35555 2871 aaKnown RBP11.91□□□□□ -0.5
CNOT1-215ENST00000569020 IGHV1-18A0A0C4DH31 117 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 A0A0G2JPF8 293 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 HNRNPCL2B2RXH8 293 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 HNRNPCL3B7ZW38 293 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 SLCO1B7G3V0H7 640 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 PHF1O43189 567 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-215ENST00000569020 LMX1BO60663 402 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 HNRNPCL1O60812 293 aaKnown RBP11.91□□□□□ -0.5
CNOT1-215ENST00000569020 LY6HO94772 140 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 AHSA1O95433 338 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 ZCCHC18P0CG32 403 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 HNRNPCL4P0DMR1 293 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 IGHV4-31P0DP07 118 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 GTF2E2P29084 291 aaKnown RBP11.91□□□□□ -0.5
CNOT1-215ENST00000569020 GZMKP49863 264 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 SELENOPP49908 381 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 P2RY4P51582 365 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 MVDP53602 400 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 MST1LQ2TV78 715 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 STK35Q8TDR2 534 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 SLC38A5Q8WUX1 472 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 TMEM19Q96HH6 336 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 SORCS2Q96PQ0 1159 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 ZNF317Q96PQ6 595 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-215ENST00000569020 ALKBH3Q96Q83 286 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-215ENST00000569020 VRK1Q99986 396 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-215ENST00000569020 KATNB1Q9BVA0 655 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 SPATA9Q9BWV2 254 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 MOV10Q9HCE1 1003 aaKnown RBP11.91□□□□□ -0.5
CNOT1-215ENST00000569020 MYOZ1Q9NP98 299 aaPredicted RBP11.91□□□□□ -0.5
CNOT1-215ENST00000569020 SLC6A13Q9NSD5 602 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 RASD1Q9Y272 281 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 IFT52Q9Y366 437 aa11.91□□□□□ -0.5
CNOT1-215ENST00000569020 ANK3Q12955 4377 aaKnown RBP11.9□□□□□ -0.5
CNOT1-215ENST00000569020 ARPC4-TTLL3A0A0A6YYG9 625 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 TMEM120BA0PK00 339 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 PDE5AO76074 875 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 LGI1O95970 557 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 SERPINF1P36955 418 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 WDR4P57081 412 aaKnown RBP11.9□□□□□ -0.5
CNOT1-215ENST00000569020 GGTLC2Q14390 218 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 RPS26P11Q5JNZ5 115 aaPredicted RBP11.9□□□□□ -0.5
CNOT1-215ENST00000569020 ATG16L1Q676U5 607 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 MSANTD1Q6ZTZ1 278 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 SLC46A3Q7Z3Q1 461 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 CLIP4Q8N3C7 705 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 MFSD8Q8NHS3 518 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 C3orf49Q96BT1 292 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 TLCD1Q96CP7 247 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 SLC25A36Q96CQ1 311 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 ITCHQ96J02 903 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 MAELQ96JY0 434 aaKnown RBP11.9□□□□□ -0.5
CNOT1-215ENST00000569020 LINC00470Q9BZP3 86 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 TMBIM4Q9HC24 238 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 CA10Q9NS85 328 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 ZIM2Q9NZV7 527 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.5
CNOT1-215ENST00000569020 LOC390937A0A1W2PQ73 354 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 VWC2LB2RUY7 222 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 TMEM229AB2RXF0 380 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 B9A039 149 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 NPIPB7O75200 414 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 SNNO75324 88 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-215ENST00000569020 UPK3AO75631 287 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 PRG2P13727 222 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-215ENST00000569020 ZNF43P17038 809 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 NR4A2P43354 598 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 SH3BGRP55822 239 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-215ENST00000569020 MAGOHP61326 146 aaKnown RBP11.89□□□□□ -0.51
CNOT1-215ENST00000569020 NAAAQ02083 359 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 LGALS3BPQ08380 585 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 CARTPTQ16568 116 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 C3orf36Q3SXR2 165 aa11.89□□□□□ -0.51
CNOT1-215ENST00000569020 GTDC1Q4AE62 458 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms