RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 AQP7P3A6NL99 342 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 DUXAA6NLW8 204 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 ZNF587BE7ETH6 402 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 ITM2AO43736 263 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 NPHS1O60500 1241 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 AK1P00568 194 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 AVPP01185 164 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 IGLV1-44P01699 117 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 HPXP02790 462 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 COL8A2P25067 703 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 CDKN2CP42773 168 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 SLC1A3P43003 542 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 SEC24CP53992 1094 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 CLDN8P56748 225 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 ROR2Q01974 943 aaKnown RBP12.82□□□□□ -0.36
USB1-214ENST00000568848 SNTB2Q13425 540 aaKnown RBP12.82□□□□□ -0.36
USB1-214ENST00000568848 MAPK11Q15759 364 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 ALKBH6Q3KRA9 238 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 KRT71Q3SY84 523 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 SPANXN4Q5MJ08 99 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 ELFN2Q5R3F8 820 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 PHYHD1Q5SRE7 291 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 ATAD3BQ5T9A4 648 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 C1orf229Q6ZS94 237 aaPredicted RBP12.82□□□□□ -0.36
USB1-214ENST00000568848 CREB3L2Q70SY1 520 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 ZNF771Q7L3S4 317 aaPredicted RBP12.82□□□□□ -0.36
USB1-214ENST00000568848 MDP1Q86V88 176 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 LRP11Q86VZ4 500 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 VRK2Q86Y07 508 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 WDFY1Q8IWB7 410 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 ZNF786Q8N393 782 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 UBASH3BQ8TF42 649 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 WDR60Q8WVS4 1066 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 CKAP2Q8WWK9 683 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
USB1-214ENST00000568848 PRPF18Q99633 342 aaKnown RBP12.82□□□□□ -0.36
USB1-214ENST00000568848 MYOZ1Q9NP98 299 aaPredicted RBP12.82□□□□□ -0.36
USB1-214ENST00000568848 MYEF2Q9P2K5 600 aaKnown RBP12.82□□□□□ -0.36
USB1-214ENST00000568848 CRNNQ9UBG3 495 aaPredicted RBP12.82□□□□□ -0.36
USB1-214ENST00000568848 MARCOQ9UEW3 520 aaPredicted RBP12.82□□□□□ -0.36
USB1-214ENST00000568848 ARHGAP32A7KAX9 2087 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 FRS3O43559 492 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 TYROBPO43914 113 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 EIF1BO60739 113 aaKnown RBP12.81□□□□□ -0.36
USB1-214ENST00000568848 SNUPNO95149 360 aaKnown RBP12.81□□□□□ -0.36
USB1-214ENST00000568848 GSNP06396 782 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 NPR2P20594 1047 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 ALDH3B1P43353 468 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 KHKP50053 298 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 HOXC5Q00444 222 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 EPS8Q12929 822 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 BHLHB9Q6PI77 547 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 C3orf56Q8N813 242 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 POMGNT2Q8NAT1 580 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 MIPOL1Q8TD10 442 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 YIPF5Q969M3 257 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 TEX37Q96LM6 180 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 SYT3Q9BQG1 590 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 SLC35A5Q9BS91 424 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 MRPL37Q9BZE1 423 aaKnown RBP12.81□□□□□ -0.36
USB1-214ENST00000568848 EXOSC3Q9NQT5 275 aaKnown RBP12.81□□□□□ -0.36
USB1-214ENST00000568848 HIF1ANQ9NWT6 349 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 RAB21Q9UL25 225 aa12.81□□□□□ -0.36
USB1-214ENST00000568848 WNK2Q9Y3S1 2297 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 LOC105371242A0A075B767 164 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 WDR91A4D1P6 747 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 AGAP5A6NIR3 686 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 TMEM229AB2RXF0 380 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 RGS16O15492 202 aaPredicted RBP12.8□□□□□ -0.36
USB1-214ENST00000568848 ZNF208O43345 1280 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 BPGMP07738 259 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 CBLP22681 906 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 UQCRC2P22695 453 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 CHI3L1P36222 383 aaPredicted RBP12.8□□□□□ -0.36
USB1-214ENST00000568848 ETV4P43268 484 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 CAPZA2P47755 286 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 CLK1P49759 484 aaKnown RBP12.8□□□□□ -0.36
USB1-214ENST00000568848 DVL1P1P54792 670 aaPredicted RBP12.8□□□□□ -0.36
USB1-214ENST00000568848 CLDN17P56750 224 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 HPCAP84074 193 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 RPS26P11Q5JNZ5 115 aaPredicted RBP12.8□□□□□ -0.36
USB1-214ENST00000568848 ATG16L1Q676U5 607 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 TMEM225Q6GV28 225 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 ZNF836Q6ZNA1 936 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 ZNF540Q8NDQ6 660 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 TAF15Q92804 592 aaKnown RBP eCLIP12.8□□□□□ -0.36
USB1-214ENST00000568848 SLC25A36Q96CQ1 311 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 C1QTNF5Q9BXJ0 243 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 AKTIPQ9H8T0 292 aa12.8□□□□□ -0.36
USB1-214ENST00000568848 PRKDCP78527 4128 aaKnown RBP12.79□□□□□ -0.36
USB1-214ENST00000568848 ARPC4-TTLL3A0A0A6YYG9 625 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 CFAP73A6NFT4 308 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 RNASET2O00584 256 aaKnown RBP12.79□□□□□ -0.36
USB1-214ENST00000568848 NCR1O76036 304 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 PDE5AO76074 875 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 IGKV3-15P01624 115 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 HLA-HP01893 362 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 GPIP06744 558 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 ADRA2CP18825 462 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 RBMXP38159 391 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms