RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 POMGNT2Q8NAT1 580 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 BHLHE22Q8NFJ8 381 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-209ENST00000567635 ELOA3Q8NG57 546 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 OR9K2Q8NGE7 335 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 OR52E4Q8NGH9 312 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 RNF217Q8TC41 542 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 BCAS4Q8TDM0 211 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 SMAP2Q8WU79 429 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-209ENST00000567635 DNAJA4Q8WW22 397 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-209ENST00000567635 FBXW5Q969U6 566 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 TMEM45BQ96B21 275 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 C3orf49Q96BT1 292 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 SLC25A36Q96CQ1 311 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 PERPQ96FX8 193 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 RADILQ96JH8 1075 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 C18orf12Q96KH6 178 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 CGREF1Q99674 301 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 SIKE1Q9BRV8 207 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 RSPO3Q9BXY4 272 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-209ENST00000567635 TRIM2Q9C040 744 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 GSX1Q9H4S2 264 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-209ENST00000567635 IKZF5Q9H5V7 419 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 SLC7A10Q9NS82 523 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 ZNF701Q9NV72 531 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-209ENST00000567635 ADPRHL2Q9NX46 363 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 TAS2R16Q9NYV7 291 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 MALT1Q9UDY8 824 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 LAMP3Q9UQV4 416 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 RASD1Q9Y272 281 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 NDUFAF1Q9Y375 327 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 CR1P17927 2039 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 HIVEP2P31629 2446 aa6.09□□□□□ -1.43
SF3B3-209ENST00000567635 ABCA2Q9BZC7 2435 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 A0A0G2JND7 137 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 A0A1B0GWA3 101 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 A0A1W2PR80 420 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 OR6C65A6NJZ3 312 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 SHISA9B4DS77 424 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 M0QX08 132 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 OVOL3O00110 214 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 PDLIM1O00151 329 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 NDUFAB1O14561 156 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ANGPT2O15123 496 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 OR2T1O43869 369 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 TPST1O60507 370 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 KRT33AO76009 404 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 MFN2O95140 757 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 AHSA1O95433 338 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ITGA5P08648 1049 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 PNMTP11086 282 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 MPGP29372 298 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 RPS5P46782 204 aaKnown RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF83P51522 516 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 P2RY4P51582 365 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 FOXG1P55316 489 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ATP5J2P56134 94 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 RPS4XP62701 263 aaKnown RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 EGR4Q05215 589 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 RBBP4Q09028 425 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 NFYCQ13952 458 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 GABRA6Q16445 453 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 CYP51A1Q16850 503 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 TSPO2Q5TGU0 170 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 C9orf135Q5VTT2 229 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ULK3Q6PHR2 472 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 C5orf46Q6UWT4 87 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 C6orf89Q6UWU4 347 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 TMEM108Q6UXF1 575 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 CREB3L2Q70SY1 520 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 NET1Q7Z628 596 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 PIGWQ7Z7B1 504 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 CPLX4Q7Z7G2 160 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 LSRQ86X29 649 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ARMC8Q8IUR7 673 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 WDR31Q8NA23 367 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 C11orf65Q8NCR3 313 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 HIPK4Q8NE63 616 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 C1orf162Q8NEQ5 155 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 OR52N5Q8NH56 324 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 NEUROG1Q92886 237 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 SLC38A4Q969I6 547 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 TAAR8Q969N4 342 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ITFG2Q969R8 447 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 KTI12Q96EK9 354 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 SLC47A1Q96FL8 570 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 TRMT61AQ96FX7 289 aaKnown RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 Q96MF0 132 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ANKRD27Q96NW4 1050 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF385AQ96PM9 386 aaKnown RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 CPPED1Q9BRF8 314 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 PRR14Q9BWN1 585 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 C1QTNF6Q9BXI9 259 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 SLCO5A1Q9H2Y9 848 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF385DQ9H6B1 395 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 EVA1AQ9H8M9 152 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 C12orf10Q9HB07 376 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 TMEM27Q9HBJ8 222 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 SLC17A5Q9NRA2 495 aa6.08□□□□□ -1.44
SF3B3-209ENST00000567635 CISD1Q9NZ45 108 aaKnown RBP6.08□□□□□ -1.44
SF3B3-209ENST00000567635 NPAP1Q9NZP6 1156 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms