RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 PIGQQ9BRB3 760 aa11.29□□□□□ -0.6
CFDP1-207ENST00000566901 TUBA8Q9NY65 449 aaPredicted RBP11.29□□□□□ -0.6
CFDP1-207ENST00000566901 SLC6A5Q9Y345 797 aa11.29□□□□□ -0.6
CFDP1-207ENST00000566901 HDGFL3Q9Y3E1 203 aa11.29□□□□□ -0.6
CFDP1-207ENST00000566901 PCDHGB7Q9Y5F8 929 aa11.29□□□□□ -0.6
CFDP1-207ENST00000566901 PCDHGB5Q9Y5G0 923 aa11.29□□□□□ -0.6
CFDP1-207ENST00000566901 PCDHGA9Q9Y5G4 932 aaKnown RBP11.29□□□□□ -0.6
CFDP1-207ENST00000566901 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
CFDP1-207ENST00000566901 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
CFDP1-207ENST00000566901 TRAV27A0A087WT01 109 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 ZC3H12DA2A288 527 aaKnown RBP11.28□□□□□ -0.6
CFDP1-207ENST00000566901 KLRC4-KLRK1H3BQV0 150 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 ARPC3O15145 178 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 IDH3BO43837 385 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 ZIC3O60481 467 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 GLSO94925 669 aaPredicted RBP11.28□□□□□ -0.6
CFDP1-207ENST00000566901 RPSAP08865 295 aaKnown RBP11.28□□□□□ -0.6
CFDP1-207ENST00000566901 FAM87AP0C7U9 286 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 IDUAP35475 653 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 ST13P50502 369 aaKnown RBP11.28□□□□□ -0.6
CFDP1-207ENST00000566901 TNFSF10P50591 281 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 CCL11P51671 97 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 ARG2P78540 354 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 EFNB1P98172 346 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 LTBQ06643 244 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 SGCBQ16585 318 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 MEDAGQ5VYS4 303 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 ACSM5Q6NUN0 579 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 ARHGAP11AQ6P4F7 1023 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 DPY19L2P2Q6ZN68 376 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 NANOGNBQ7Z5D8 188 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 FAM26EQ8N5C1 309 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 EXD3Q8N9H8 876 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 OR4Q3Q8NH05 313 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 APH1BQ8WW43 257 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 TM9SF4Q92544 642 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 Q96MT0 163 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 GNRHR2Q96P88 292 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 FN3KQ9H479 309 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 ZNF703Q9H7S9 590 aaPredicted RBP11.28□□□□□ -0.6
CFDP1-207ENST00000566901 PLCXD1Q9NUJ7 323 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 MRPL39Q9NYK5 338 aaKnown RBP11.28□□□□□ -0.6
CFDP1-207ENST00000566901 ZNF226Q9NYT6 803 aa11.28□□□□□ -0.6
CFDP1-207ENST00000566901 SPTAN1Q13813 2472 aaKnown RBP11.27□□□□□ -0.61
CFDP1-207ENST00000566901 PCNX3Q9H6A9 2034 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 TRAV17A0A0B4J275 112 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 OR2M5A3KFT3 312 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 NPIPB13A6NJU9 1138 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 A6NL46 340 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 GJE1A6NN92 205 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 CYSRT1A8MQ03 144 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 NPIPB4C9JG80 1138 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 G3V3Y1 287 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 M0R3G1 203 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 SLC1A7O00341 560 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 IMPA2O14732 288 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 SURF4O15260 269 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 DNPH1O43598 174 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 MRPS14O60783 128 aaKnown RBP11.27□□□□□ -0.61
CFDP1-207ENST00000566901 WBP4O75554 376 aaKnown RBP11.27□□□□□ -0.61
CFDP1-207ENST00000566901 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 HPNP05981 417 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 PEPDP12955 493 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 CRHBPP24387 322 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 RPS5P46782 204 aaKnown RBP11.27□□□□□ -0.61
CFDP1-207ENST00000566901 ZNF239Q16600 458 aaKnown RBP11.27□□□□□ -0.61
CFDP1-207ENST00000566901 OCLNQ16625 522 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 RAET1LQ5VY80 246 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 TMEM236Q5W0B7 351 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 LAIR2Q6ISS4 152 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 POMZP3Q6PJE2 187 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 IGFL3Q6UXB1 125 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 PTCHD4Q6ZW05 846 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 CCDC103Q8IW40 242 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 SULF2Q8IWU5 870 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 IQCF1Q8N6M8 205 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 C10orf53Q8N6V4 93 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 ZFP62Q8NB50 900 aaPredicted RBP11.27□□□□□ -0.61
CFDP1-207ENST00000566901 OR5J2Q8NH18 312 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 OR51A7Q8NH64 312 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 TMEM163Q8TC26 289 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 JSRP1Q96MG2 331 aaPredicted RBP11.27□□□□□ -0.61
CFDP1-207ENST00000566901 MOGAT1Q96PD6 335 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 TNFRSF13CQ96RJ3 184 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 NPAS1Q99742 590 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 ASPNQ9BXN1 380 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 ADNPQ9H2P0 1102 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 FANCFQ9NPI8 374 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 CMC2Q9NRP2 79 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 ALKBH4Q9NXW9 302 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 PLA2G3Q9NZ20 509 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 SCOCQ9UIL1 159 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 TRAPPC4Q9Y296 219 aa11.27□□□□□ -0.61
CFDP1-207ENST00000566901 MPDZO75970 2070 aa11.26□□□□□ -0.61
CFDP1-207ENST00000566901 SPTBN1Q01082 2364 aaKnown RBP11.26□□□□□ -0.61
CFDP1-207ENST00000566901 PINLYPA6NC86 204 aa11.26□□□□□ -0.61
CFDP1-207ENST00000566901 LIPT2A6NK58 231 aa11.26□□□□□ -0.61
CFDP1-207ENST00000566901 TRIM64CA6NLI5 447 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms