RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TMEM99Q8N816 258 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 RELL2Q8NC24 303 aaPredicted RBP7.28□□□□□ -1.24
CDH13-208ENST00000566333 ADPRHL1Q8NDY3 354 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 OR4K5Q8NGD3 323 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 OR2T29Q8NH02 315 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 OR52J3Q8NH60 311 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 RSRC1Q96IZ7 334 aaKnown RBP7.28□□□□□ -1.24
CDH13-208ENST00000566333 ZFP3Q96NJ6 502 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 ZNF347Q96SE7 839 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 ZNF587Q96SQ5 575 aaPredicted RBP7.28□□□□□ -1.24
CDH13-208ENST00000566333 EPYCQ99645 322 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 PSD2Q9BQI7 771 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 SLC5A6Q9Y289 635 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 UNC79Q9P2D8 2635 aa7.28□□□□□ -1.24
CDH13-208ENST00000566333 IGKV3D-15A0A087WSY6 115 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 A0A1W2PNV4 684 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 WIPF3A6NGB9 483 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 CDC42EP2O14613 210 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 TRAF3IP2O43734 574 aaPredicted RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 OR2T1O43869 369 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 EIF1BO60739 113 aaKnown RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 ZG16O60844 167 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 ENTPD5O75356 428 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 TIPRLO75663 272 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 OR7A10O76100 309 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 RCBTB2O95199 551 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 GADD45GO95257 159 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 SYNGR4O95473 234 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 CH25HO95992 272 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 HPRP00739 348 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 MT-ATP6P00846 226 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 HOXB6P17509 224 aaKnown RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 CBLP22681 906 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 EDNRAP25101 427 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 AGTR1P30556 359 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 KIR2DL2P43627 348 aaPredicted RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 GPR4P46093 362 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 OMPP47874 163 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 HMGA2P52926 109 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 IST1P53990 364 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 RPS4XP62701 263 aaKnown RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 PRKCDQ05655 676 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 PPP1R8Q12972 351 aaKnown RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 SLC17A1Q14916 467 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 LAPTM4AQ15012 233 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 POU4F3Q15319 338 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 SF3B4Q15427 424 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDH13-208ENST00000566333 SGCBQ16585 318 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 OTUD3Q5T2D3 398 aaPredicted RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 ZNF770Q6IQ21 691 aaPredicted RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 HMBOX1Q6NT76 420 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 PPP4R4Q6NUP7 873 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 ZNF730Q6ZMV8 503 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 CHMP1BQ7LBR1 199 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 TMEM179BQ7Z7N9 219 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 CCDC71Q8IV32 467 aaPredicted RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 LIX1LQ8IVB5 337 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 SCAIQ8N9R8 606 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 OR9Q2Q8NGE9 314 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 PIGXQ8TBF5 258 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 ITLN2Q8WWU7 325 aaPredicted RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 LIPHQ8WWY8 451 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 PYDC1Q8WXC3 89 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 BPIFA2Q96DR5 249 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 ZHX1-C8orf76Q96EF9 292 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 GMPPAQ96IJ6 420 aaPredicted RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 FAM46AQ96IP4 442 aaKnown RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 HS6ST2Q96MM7 605 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 RAB3IPQ96QF0 476 aaPredicted RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 GPA33Q99795 319 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 TM9SF2Q99805 663 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 TAPBPLQ9BX59 468 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 FKRPQ9H9S5 495 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 BCO1Q9HAY6 547 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 NTN4Q9HB63 628 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 CHST11Q9NPF2 352 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 TIGARQ9NQ88 270 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 ARMC1Q9NVT9 282 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 MRPL39Q9NYK5 338 aaKnown RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 KLHL13Q9P2N7 655 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 ZNF229Q9UJW7 825 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 CLEC4AQ9UMR7 237 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 RNF6Q9Y252 685 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 MED31Q9Y3C7 131 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 BOLA1Q9Y3E2 137 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 FAM32AQ9Y421 112 aaKnown RBP7.27□□□□□ -1.25
CDH13-208ENST00000566333 CORINQ9Y5Q5 1042 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 CELSR2Q9HCU4 2923 aa7.27□□□□□ -1.25
CDH13-208ENST00000566333 TACC2O95359 2948 aa7.26□□□□□ -1.25
CDH13-208ENST00000566333 TNFRSF11BO00300 401 aa7.26□□□□□ -1.25
CDH13-208ENST00000566333 PLPP3O14495 311 aa7.26□□□□□ -1.25
CDH13-208ENST00000566333 KRT36O76013 467 aa7.26□□□□□ -1.25
CDH13-208ENST00000566333 CST1P01037 141 aa7.26□□□□□ -1.25
CDH13-208ENST00000566333 CGAP01215 116 aa7.26□□□□□ -1.25
CDH13-208ENST00000566333 CRHP06850 196 aa7.26□□□□□ -1.25
CDH13-208ENST00000566333 TMIGD3P0DMS9 266 aaPredicted RBP7.26□□□□□ -1.25
CDH13-208ENST00000566333 IFI30P13284 250 aa7.26□□□□□ -1.25
CDH13-208ENST00000566333 ZNF26P17031 533 aaPredicted RBP7.26□□□□□ -1.25
CDH13-208ENST00000566333 UQCRC1P31930 480 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms