RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CACYBPQ9HB71 228 aaKnown RBP16.03■□□□□ 0.16
USB1-213ENST00000566292 FTCDNL1E5RQL4 147 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 POLR3GO15318 223 aaPredicted RBP16.02■□□□□ 0.16
USB1-213ENST00000566292 VAMP5O95183 116 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 TGDSO95455 350 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 CDH2P19022 906 aaPredicted RBP16.02■□□□□ 0.16
USB1-213ENST00000566292 IDH3AP50213 366 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 FABP6P51161 128 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 STX1BP61266 288 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 DMTNQ08495 405 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 HIKESHIQ53FT3 197 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 BLOC1S3Q6QNY0 202 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 LINGO2Q7L985 606 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 COMTD1Q86VU5 262 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 EPHX4Q8IUS5 362 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 FBXL14Q8N1E6 418 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 DEPDC4Q8N2C3 294 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 GOLGA6L1Q8N7Z2 621 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 HTRA1Q92743 480 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 SLC35B4Q969S0 331 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 BOD1Q96IK1 185 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 ADAD1Q96M93 576 aaKnown RBP16.02■□□□□ 0.16
USB1-213ENST00000566292 SLC52A3Q9NQ40 469 aa16.02■□□□□ 0.16
USB1-213ENST00000566292 IGHV4-30-2A0A087WSY4 118 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 A0A096LNT2 108 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 CRLF1O75462 422 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 AHSA1O95433 338 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 ARAFP10398 606 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 PRPS1P60891 318 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 PAGE3Q5JUK9 113 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 ZNF544Q6NX49 715 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 KDM8Q8N371 416 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 MFSD8Q8NHS3 518 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 NFKBIDQ8NI38 313 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 SLC25A36Q96CQ1 311 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 SPDL1Q96EA4 605 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 KTI12Q96EK9 354 aaPredicted RBP16.01■□□□□ 0.15
USB1-213ENST00000566292 ALKBH3Q96Q83 286 aaPredicted RBP16.01■□□□□ 0.15
USB1-213ENST00000566292 CCDC167Q9P0B6 97 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 VAPAQ9P0L0 249 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 SEC14L4Q9UDX3 406 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 RASD1Q9Y272 281 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 ATP23Q9Y6H3 246 aa16.01■□□□□ 0.15
USB1-213ENST00000566292 TRBV5-3A0A0A0MS03 114 aa16■□□□□ 0.15
USB1-213ENST00000566292 C5orf58C9J3I9 102 aa16■□□□□ 0.15
USB1-213ENST00000566292 ATP6V1G2-DDX39BF2Z307 99 aa16■□□□□ 0.15
USB1-213ENST00000566292 NR5A2O00482 541 aa16■□□□□ 0.15
USB1-213ENST00000566292 FZD7O75084 574 aa16■□□□□ 0.15
USB1-213ENST00000566292 LGI1O95970 557 aa16■□□□□ 0.15
USB1-213ENST00000566292 PNMTP11086 282 aa16■□□□□ 0.15
USB1-213ENST00000566292 ETS2P15036 469 aa16■□□□□ 0.15
USB1-213ENST00000566292 RPS5P46782 204 aaKnown RBP16■□□□□ 0.15
USB1-213ENST00000566292 NUDT6P53370 316 aa16■□□□□ 0.15
USB1-213ENST00000566292 C1QTNF12Q5T7M4 302 aa16■□□□□ 0.15
USB1-213ENST00000566292 NIPAL3Q6P499 406 aa16■□□□□ 0.15
USB1-213ENST00000566292 C6orf89Q6UWU4 347 aa16■□□□□ 0.15
USB1-213ENST00000566292 ABHD12BQ7Z5M8 362 aaPredicted RBP16■□□□□ 0.15
USB1-213ENST00000566292 OR10H5Q8NGA6 315 aa16■□□□□ 0.15
USB1-213ENST00000566292 OR1K1Q8NGR3 316 aa16■□□□□ 0.15
USB1-213ENST00000566292 LRRC8CQ8TDW0 803 aa16■□□□□ 0.15
USB1-213ENST00000566292 CCDC28BQ9BUN5 200 aa16■□□□□ 0.15
USB1-213ENST00000566292 IKZF5Q9H5V7 419 aa16■□□□□ 0.15
USB1-213ENST00000566292 FKRPQ9H9S5 495 aa16■□□□□ 0.15
USB1-213ENST00000566292 TMEM45AQ9NWC5 275 aa16■□□□□ 0.15
USB1-213ENST00000566292 ELOA3DA6NLF2 546 aaPredicted RBP15.99■□□□□ 0.15
USB1-213ENST00000566292 ZNF587BE7ETH6 402 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 H7C417 338 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 CD5LO43866 347 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 UPK3AO75631 287 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 KRT33AO76009 404 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 WNT11O96014 354 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 HTR2AP28223 471 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 PRKAR1BP31321 381 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 ELOA3BQ3SY89 546 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 TBRG1Q3YBR2 411 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 GLIPR1L2Q4G1C9 344 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 GCNT6Q5T4J0 391 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 KLHL24Q6TFL4 600 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 ELOA3Q8NG57 546 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 MDFIQ99750 246 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 RHNO1Q9BSD3 238 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 PRR14Q9BWN1 585 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 NELFAQ9H3P2 528 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 B3GAT1Q9P2W7 334 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 MOKQ9UQ07 419 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 GMEB1Q9Y692 573 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 ATRQ13535 2644 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 RTTNQ86VV8 2226 aa15.99■□□□□ 0.15
USB1-213ENST00000566292 IGHV1-18A0A0C4DH31 117 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 A0A1B0GWA3 101 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 TPST1O60507 370 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 APOBEC3AP31941 199 aaPredicted RBP15.98■□□□□ 0.15
USB1-213ENST00000566292 AQP5P55064 265 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 CLDN17P56750 224 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 CDK6Q00534 326 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 RAB35Q15286 201 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 TTMPQ5BVD1 217 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 REEP3Q6NUK4 255 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 DHRS4L2Q6PKH6 230 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 ZNF525Q8N782 197 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms