RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 SLC22A7Q9Y694 548 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 EVPLQ92817 2033 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 A0A1W2PPH5 198 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 CTDSPLO15194 276 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 MC1RQ01726 317 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 ST3GAL2Q16842 350 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 DLEU7Q6UYE1 221 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 CARFQ8N187 725 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 SLC35G3Q8N808 338 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 GCDHQ92947 438 aaPredicted RBP5.84□□□□□ -1.48
CLK3-212ENST00000563418 C4orf36Q96KX1 117 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 MCHR1Q99705 422 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 IL17BQ9UHF5 180 aa5.84□□□□□ -1.48
CLK3-212ENST00000563418 COL1A1P02452 1464 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 PLSCR5A0PG75 271 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ZNF207O43670 478 aaKnown RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 CNMDO75829 334 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 STK17BO94768 372 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 PAPLNO95428 1278 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 HLA-DQB1P01920 261 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 OR13C7P0DN81 318 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 EPHA1P21709 976 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ERVPABLB-1P60509 514 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 GLYR1Q49A26 553 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 AWAT1Q58HT5 328 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ZNF322Q6U7Q0 402 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 ASB17Q8WXJ9 295 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 HMCESQ96FZ2 354 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 TMEM38AQ9H6F2 299 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 TMEM212A6NML5 194 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 RAD51DO75771 328 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ACAA1P09110 424 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 MTHFD2P13995 350 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 TGFBR1P36897 503 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 HBG1P69891 147 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 HBG2P69892 147 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 NKPD1Q17RQ9 610 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 PLEKHS1Q5SXH7 462 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 IL20RBQ6UXL0 311 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 OR4C15Q8NGM1 316 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 TAAR9Q96RI9 348 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 MAST2Q6P0Q8 1798 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 TCRBV16S1A1N1A0A5B0 115 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CST4P01036 141 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CFHP08603 1231 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SNRPBP14678 240 aaKnown RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 SERPINA2P20848 420 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CASRP41180 1078 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 DGKEP52429 567 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ACY1Q03154 408 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 DYRK2Q92630 601 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SLC2A13Q96QE2 648 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 LPAR3Q9UBY5 353 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 A0A1B0GV50 99 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 RECQL4O94761 1208 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 DIRAS3O95661 229 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 HSD11B2P80365 405 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 RAB35Q15286 201 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 NKAIN2Q5VXU1 208 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 MFSD14CQ5VZR4 134 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 THOC6Q86W42 341 aaKnown RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 OR52B6Q8NGF0 335 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 OR2AJ1Q8NGZ0 328 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ZNF514Q96K75 400 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 STEAP1Q9UHE8 339 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CFAP20Q9Y6A4 193 aaKnown RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 hCG_1809904A0A1W2PP81 198 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 A0A1W2PR64 198 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 A0A1W2PRV1 198 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 C5orf52A6NGY3 159 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CCL22O00626 93 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 UBE2CO00762 179 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 HEXAP06865 529 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 HCKP08631 526 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 FOLR1P15328 257 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ACHEP22303 614 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 PRPS1P60891 318 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CSNK2A1P68400 391 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 DGCR2P98153 550 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 TSPAN31Q12999 210 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SPIN3Q5JUX0 258 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 FAM74A1Q5RGS3 127 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CSNK2A3Q8NEV1 391 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 MS4A10Q96PG2 267 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 TMEM100Q9NV29 134 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ANHXE9PGG2 379 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CSTBP04080 98 aaKnown RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 EPHX1P07099 455 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 STAG3L2P0CL84 134 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 CD99P14209 185 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 AK4P27144 223 aaPredicted RBP5.83□□□□□ -1.48
CLK3-212ENST00000563418 CRYBB2P43320 205 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ERVFRD-1P60508 538 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 NFATC4Q14934 902 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ELOCQ15369 112 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 DHCR24Q15392 516 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 SYT14P1Q58G82 188 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 PRAMEF18Q5VWM3 479 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ZNF321PQ8N8H1 164 aa5.83□□□□□ -1.48
CLK3-212ENST00000563418 ESAMQ96AP7 390 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms