RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 LIPT2A6NK58 231 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 LRRN3E7EW58 273 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 AQP7O14520 342 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 DNPH1O43598 174 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 MITFO75030 526 aaPredicted RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 ZNF708P17019 499 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 POU3F2P20265 443 aaPredicted RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 STARP49675 285 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 AQP4P55087 323 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 NUP107P57740 925 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 RPS4XP62701 263 aaKnown RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 CSNK2A1P68400 391 aaPredicted RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 SLC35A1P78382 337 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 IL1RL1Q01638 556 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 NPRL3Q12980 569 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 TAF11Q15544 211 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 CTU2Q2VPK5 515 aaKnown RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 PDSS1Q5T2R2 415 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 ZNF324BQ6AW86 544 aaPredicted RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 FAM180AQ6UWF9 173 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 IZUMO2Q6UXV1 221 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 GALNT5Q7Z7M9 940 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 OAFQ86UD1 273 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 LSRQ86X29 649 aaPredicted RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 MEX3DQ86XN8 651 aaKnown RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 SLC43A2Q8N370 569 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 C10orf53Q8N6V4 93 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 LRRC17Q8N6Y2 441 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 SCAIQ8N9R8 606 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 ADGRG7Q96K78 797 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 ASPNQ9BXN1 380 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 EXO5Q9H790 373 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 ALKBH4Q9NXW9 302 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 MRPL39Q9NYK5 338 aaKnown RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 PLEKHB1Q9UF11 243 aaPredicted RBP13.24□□□□□ -0.29
CDH11-207ENST00000563255 HIF3AQ9Y2N7 669 aa13.24□□□□□ -0.29
CDH11-207ENST00000563255 UNC79Q9P2D8 2635 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 A0A1W2PNR3 127 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 NPIPA5E9PKD4 350 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 E9PQ18 207 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 SULT2B1O00204 365 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 RCBTB2O95199 551 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 SNAP29O95721 258 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 OPN1LWP04000 364 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 HIST1H2ABP04908 130 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 CPN1P15169 458 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 GTF2E2P29084 291 aaKnown RBP13.23□□□□□ -0.29
CDH11-207ENST00000563255 HSPA13P48723 471 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 DIO1P49895 249 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 SUCLG1P53597 346 aaKnown RBP13.23□□□□□ -0.29
CDH11-207ENST00000563255 CRISP1P54107 249 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 CLDN18P56856 261 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 CLDN20P56880 219 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 PRPS1P60891 318 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 FHL1Q13642 323 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 OR7A5Q15622 319 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 SGCBQ16585 318 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 ZNF239Q16600 458 aaKnown RBP13.23□□□□□ -0.29
CDH11-207ENST00000563255 KRTCAP3Q53RY4 240 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 ZNF620Q6ZNG0 422 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 HIST3H2AQ7L7L0 130 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 KIF18BQ86Y91 864 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 OR13C2Q8NGS9 318 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 OR5J2Q8NH18 312 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 SMPDL3BQ92485 455 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 HIST1H2ACQ93077 130 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 SLC25A36Q96CQ1 311 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 GPR137Q96N19 417 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 TNFRSF13CQ96RJ3 184 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 ZNF184Q99676 751 aaPredicted RBP13.23□□□□□ -0.29
CDH11-207ENST00000563255 TIMP4Q99727 224 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 TOR3AQ9H497 397 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 PAQR5Q9NXK6 330 aaPredicted RBP13.23□□□□□ -0.29
CDH11-207ENST00000563255 NPIPA1Q9UND3 350 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 CDH10Q9Y6N8 788 aa13.23□□□□□ -0.29
CDH11-207ENST00000563255 A1L4Q6 167 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 OR14I1A6ND48 311 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 EIF1AYO14602 144 aaKnown RBP13.22□□□□□ -0.29
CDH11-207ENST00000563255 TNFSF11O14788 317 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 SLC16A6O15403 523 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 EIF1BO60739 113 aaKnown RBP13.22□□□□□ -0.29
CDH11-207ENST00000563255 GRPRP30550 384 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 UQCRC1P31930 480 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 CLDN15P56746 228 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 OR2B6P58173 313 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 FXYD6P3P58550 94 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 RAC3P60763 192 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 H3F3AP84243 136 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 ZP4Q12836 540 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 ZIK1Q3SY52 487 aaPredicted RBP13.22□□□□□ -0.29
CDH11-207ENST00000563255 HBMQ6B0K9 141 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 SMARCD3Q6STE5 483 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 H1FNTQ75WM6 255 aaPredicted RBP13.22□□□□□ -0.29
CDH11-207ENST00000563255 DHRSXQ8N5I4 330 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 MEIOBQ8N635 442 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 ADPRHL1Q8NDY3 354 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 OR51A7Q8NH64 312 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 OR2V1Q8NHB1 315 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 FAR1Q8WVX9 515 aa13.22□□□□□ -0.29
CDH11-207ENST00000563255 OSTF1Q92882 214 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms