RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 IQCCQ4KMZ1 466 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 HIKESHIQ53FT3 197 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 LRRC74BQ6ZQY2 392 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 SLC46A3Q7Z3Q1 461 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 TMEM99Q8N816 258 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 C3orf49Q96BT1 292 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 AURKBQ96GD4 344 aaPredicted RBP10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 ZNF385AQ96PM9 386 aaKnown RBP10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 SLC38A2Q96QD8 506 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 VRK1Q99986 396 aaPredicted RBP10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 KCNS3Q9BQ31 491 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 SLC35A5Q9BS91 424 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 SLC38A1Q9H2H9 487 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 PLK3Q9H4B4 646 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 AKTIPQ9H8T0 292 aa10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 MTHFD2LQ9H903 347 aaPredicted RBP10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 MOV10Q9HCE1 1003 aaKnown RBP10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 CRNNQ9UBG3 495 aaPredicted RBP10.3□□□□□ -0.76
CARMIL3-204ENST00000561354 ARPC4-TTLL3A0A0A6YYG9 625 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 CFAP73A6NFT4 308 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 LIPT2A6NK58 231 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 HNRNPCL1O60812 293 aaKnown RBP10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 ATP5HO75947 161 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 AKR7A3O95154 331 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 VAMP5O95183 116 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 OR4A8P0C604 315 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 CDH2P19022 906 aaPredicted RBP10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 RPS4Y1P22090 263 aaKnown RBP10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 GIFP27352 417 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 CHI3L1P36222 383 aaPredicted RBP10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 PPOXP50336 477 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 NAAAQ02083 359 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 EPS8Q12929 822 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 CEACAM7Q14002 265 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 GNA13Q14344 377 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 ADIPOQQ15848 244 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 SYPL1Q16563 259 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 CR1LQ2VPA4 569 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 TMEM225Q6GV28 225 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 CGB2Q6NT52 195 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 ANKRD16Q6P6B7 361 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 NUDCD3Q8IVD9 361 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 ZNF440Q8IYI8 595 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 RFLNBQ8N5W9 214 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 FAM169BQ8N8A8 192 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 ANKFN1Q8N957 763 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 OR1K1Q8NGR3 316 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 MAGEE2Q8TD90 523 aaPredicted RBP10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 WDR60Q8WVS4 1066 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 CCDC115Q96NT0 180 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 BPESC1Q9GZL8 116 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 RAB1BQ9H0U4 201 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 BTNL2Q9UIR0 455 aa10.29□□□□□ -0.76
CARMIL3-204ENST00000561354 OR6C65A6NJZ3 312 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 ZNF587BE7ETH6 402 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 DNAJC8O75937 253 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 KRT33AO76009 404 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 SNUPNO95149 360 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 STAMBPO95630 424 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 IGLV1-44P01699 117 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 DBIP07108 87 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 CHRM4P08173 479 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 HOXB1P14653 301 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 IL7RP16871 459 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 CXCR1P25024 350 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 S100A3P33764 101 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 ANXA11P50995 505 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 IDH3GP51553 393 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 CLNS1AP54105 237 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 UBE2NP61088 152 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 OR7A5Q15622 319 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 PDCD2Q16342 344 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 CARTPTQ16568 116 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 ZSWIM7Q19AV6 140 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 SPANXN4Q5MJ08 99 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 MRPL2Q5T653 305 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 CREB3L2Q70SY1 520 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 SPATA19Q7Z5L4 167 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 GPAT4Q86UL3 456 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 RNF130Q86XS8 419 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 ZNF781Q8N8C0 355 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 NUP37Q8NFH4 326 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 OR4F15Q8NGB8 312 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 C10orf82Q8WW14 230 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 NEU4Q8WWR8 484 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 BCL2L2Q92843 193 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 HPS1Q92902 700 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 LRRC37BQ96QE4 947 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 SOX7Q9BT81 388 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 ZNF442Q9H7R0 627 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 SLCO1B3Q9NPD5 702 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 THAP1Q9NVV9 213 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 NBEAL1Q6ZS30 2694 aa10.28□□□□□ -0.76
CARMIL3-204ENST00000561354 WDR91A4D1P6 747 aa10.27□□□□□ -0.77
CARMIL3-204ENST00000561354 CDHR4A6H8M9 788 aa10.27□□□□□ -0.77
CARMIL3-204ENST00000561354 A8MVM7 634 aa10.27□□□□□ -0.77
CARMIL3-204ENST00000561354 VSTM5A8MXK1 200 aa10.27□□□□□ -0.77
CARMIL3-204ENST00000561354 E9PBE3 544 aa10.27□□□□□ -0.77
CARMIL3-204ENST00000561354 TCF21O43680 179 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms