RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 P2RY6Q15077 328 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 TSC22D1Q15714 1073 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 SFRP5Q5T4F7 317 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 NHLRC1Q6VVB1 395 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 EPHX4Q8IUS5 362 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 TMEM45BQ96B21 275 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 SLC25A36Q96CQ1 311 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 SLC41A3Q96GZ6 507 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 ZNF385AQ96PM9 386 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 B3GAT1Q9P2W7 334 aa13.5□□□□□ -0.25
SNRPA1-213ENST00000560856 MYO9AB2RTY4 2548 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 LRRN3E7EW58 273 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 M0R082 166 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 PDLIM1O00151 329 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 VAMP5O95183 116 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 GOSR1O95249 250 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 PTNP21246 168 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 IGHV1-2P23083 117 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 GRPRP30550 384 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 FOXG1P55316 489 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 SLC25A3Q00325 362 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 ITGADQ13349 1161 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 POU4F3Q15319 338 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 FXNQ16595 210 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 GKAP1Q5VSY0 366 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 FBXW9Q5XUX1 488 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 CREB3L2Q70SY1 520 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 CBLL1Q75N03 491 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 VTCN1Q7Z7D3 282 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 ZNF100Q8IYN0 542 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 PGAM4Q8N0Y7 254 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 KDM8Q8N371 416 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 CCDC197Q8NCU1 140 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 ZNF417Q8TAU3 575 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 RNF217Q8TC41 542 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 APH1AQ96BI3 265 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 MOGAT1Q96PD6 335 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 ZNF587Q96SQ5 575 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 KCTD14Q9BQ13 255 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 MED18Q9BUE0 208 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 HDHD5Q9BXW7 423 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 SPAG4Q9NPE6 437 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 FANCFQ9NPI8 374 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 SELENONQ9NZV5 590 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 CD300AQ9UGN4 299 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 SLC7A7Q9UM01 511 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 RASD1Q9Y272 281 aa13.49□□□□□ -0.25
SNRPA1-213ENST00000560856 LOC102725191A0A1B0GVB3 256 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 MS4A18H0YCH9 400 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 KLF4O43474 513 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 MRPL33O75394 65 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 OR5F1O95221 314 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 IGHV3-9P01782 118 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 PPP3CBP16298 524 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 NCK1P16333 377 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 GGT1P19440 569 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 FUT4P22083 530 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 PIN1Q13526 163 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 MS4A18Q3C1V0 323 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 TSPO2Q5TGU0 170 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 TMEM225Q6GV28 225 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 H1FNTQ75WM6 255 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 TSEN54Q7Z6J9 526 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 TMEM200AQ86VY9 491 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 CDC20BQ86Y33 519 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 ZNF433Q8N7K0 673 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 ADPRHL1Q8NDY3 354 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 STEAP2Q8NFT2 490 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 S100PBPQ96BU1 408 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 TPD52L3Q96J77 140 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 MPP4Q96JB8 637 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 EPYCQ99645 322 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 POLR2J2Q9GZM3 115 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 ACTR6Q9GZN1 396 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 POLR2J3Q9H1A7 115 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 CLEC4MQ9H2X3 399 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 SLC7A10Q9NS82 523 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 MALT1Q9UDY8 824 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 RIMS3Q9UJD0 308 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 A4GNTQ9UNA3 340 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 B3GALT5Q9Y2C3 310 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 SNX13Q9Y5W8 968 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 CADP27708 2225 aa13.48□□□□□ -0.25
SNRPA1-213ENST00000560856 AKAP9Q99996 3911 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 CASKO14936 926 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 GSTA4O15217 222 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 HPRP00739 348 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 T-ENOLP0DO92 83 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 HSD17B1P14061 328 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 CBLP22681 906 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 MFSD13AQ14CX5 517 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 SEZ6L2Q6UXD5 910 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 CASP12Q6UXS9 341 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 DEF8Q6ZN54 512 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 GPAT4Q86UL3 456 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 NKAIN4Q8IVV8 208 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 RNF148Q8N7C7 305 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 FAM156AQ8NDB6 213 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 NRGNQ92686 78 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 ZC3HAV1LQ96H79 300 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms