RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PDZK1Q5T2W1 519 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 C1orf146Q5VVC0 180 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 KANK2Q63ZY3 851 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 PGM2L1Q6PCE3 622 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 VHLLQ6RSH7 139 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 TRIM46Q7Z4K8 759 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 MYPOPQ86VE0 399 aaPredicted RBP8.58□□□□□ -1.04
TPM1-225ENST00000560679 CLHC1Q8NHS4 586 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 ZFP28Q8NHY6 868 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 ST8SIA1Q92185 356 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 TMEM186Q96B77 213 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 BOD1Q96IK1 185 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 SLC38A2Q96QD8 506 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 KATNB1Q9BVA0 655 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 OR11A1Q9GZK7 315 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 RAB1BQ9H0U4 201 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 LPAR2Q9HBW0 351 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 ACSS1Q9NUB1 689 aaPredicted RBP8.58□□□□□ -1.04
TPM1-225ENST00000560679 ZCCHC3Q9NUD5 404 aaKnown RBP8.58□□□□□ -1.04
TPM1-225ENST00000560679 NDE1Q9NXR1 346 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 KCNE5Q9UJ90 142 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 PRPF19Q9UMS4 504 aaKnown RBP8.58□□□□□ -1.04
TPM1-225ENST00000560679 USP22Q9UPT9 525 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 FIS1Q9Y3D6 152 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 DTNAQ9Y4J8 743 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 FLVCR1Q9Y5Y0 555 aa8.58□□□□□ -1.04
TPM1-225ENST00000560679 LOC100653049A0A140TA62 436 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 TMEM129A0AVI4 362 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 hCG_2039718K7EN88 272 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 WNT9BO14905 357 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 UBDO15205 165 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 AKAP10O43572 662 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 KRT34O76011 436 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 PMS2P2O95744 297 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 WNT11O96014 354 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 AVPP01185 164 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 FGF4P08620 206 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 CECR9P0C854 216 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 IFNGR1P15260 489 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 KHKP50053 298 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 NUDT2P50583 147 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 PRPS1P60891 318 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 H3F3AP84243 136 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 NAAAQ02083 359 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 PLAURQ03405 335 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 HGFACQ04756 655 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 UGT3A2Q3SY77 523 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 C1QTNF12Q5T7M4 302 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 CLEC6AQ6EIG7 209 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 TREML4Q6UXN2 200 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 OLIG3Q7RTU3 272 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 CARM1Q86X55 608 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 CDK20Q8IZL9 346 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 DEFB107AQ8IZN7 70 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 ZDHHC22Q8N966 263 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 CLDND2Q8NHS1 167 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 UBASH3BQ8TF42 649 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 SLC25A43Q8WUT9 341 aaPredicted RBP8.57□□□□□ -1.04
TPM1-225ENST00000560679 NEU4Q8WWR8 484 aaPredicted RBP8.57□□□□□ -1.04
TPM1-225ENST00000560679 PPCDCQ96CD2 204 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 RCN3Q96D15 328 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 FCRL1Q96LA6 429 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 TSSK3Q96PN8 268 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 DOK1Q99704 481 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 THUMPD3Q9BV44 507 aaKnown RBP8.57□□□□□ -1.04
TPM1-225ENST00000560679 HOXD1Q9GZZ0 328 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 RACGAP1Q9H0H5 632 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 REEP4Q9H6H4 257 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 MID1IP1Q9NPA3 183 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 CTPS2Q9NRF8 586 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 ACER3Q9NUN7 267 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 GPATCH2Q9NW75 528 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 STX18Q9P2W9 335 aaKnown RBP8.57□□□□□ -1.04
TPM1-225ENST00000560679 PCDHB14Q9Y5E9 798 aa8.57□□□□□ -1.04
TPM1-225ENST00000560679 KMT2CQ8NEZ4 4911 aaKnown RBP8.56□□□□□ -1.04
TPM1-225ENST00000560679 LOC105371242A0A075B767 164 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 AIM2O14862 343 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 DNPH1O43598 174 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 FKBP6O75344 327 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 CYP7B1O75881 506 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 IGLV1-44P01699 117 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 MSMBP08118 114 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 TFPIP10646 304 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 CDH2P19022 906 aaPredicted RBP8.56□□□□□ -1.04
TPM1-225ENST00000560679 THBS4P35443 961 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 SLC1A3P43003 542 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 LIMS1P48059 325 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 STX1BP61266 288 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 TUBA1BP68363 451 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 TUBA4AP68366 448 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 IL1RL1Q01638 556 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 TGFBR3Q03167 851 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 SLC34A1Q06495 639 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 SCGB2A2Q13296 93 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 SLC17A1Q14916 467 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 SHQ1Q6PI26 577 aaKnown RBP8.56□□□□□ -1.04
TPM1-225ENST00000560679 KLHL24Q6TFL4 600 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 SHISA2Q6UWI4 295 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 TUBA1AQ71U36 451 aa8.56□□□□□ -1.04
TPM1-225ENST00000560679 PGAM4Q8N0Y7 254 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms