RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CARM1Q86X55 608 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 KIF18BQ86Y91 864 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 GCNT2Q8N0V5 402 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 TPD52L3Q96J77 140 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 SF3B5Q9BWJ5 86 aaKnown RBP12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 YY1AP1Q9H869 796 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 C8orf4Q9NR00 106 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 CORINQ9Y5Q5 1042 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 MED12LQ86YW9 2145 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 IGKV3D-15A0A087WSY6 115 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 LIPT2A6NK58 231 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 KDM4EB2RXH2 506 aaPredicted RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 SMAD9O15198 467 aaKnown RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 TPST2O60704 377 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 DEAF1O75398 565 aaPredicted RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 CNOT4O95628 575 aaKnown RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 MT-ATP6P00846 226 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 IFNW1P05000 195 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 YES1P07947 543 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 GTF2E2P29084 291 aaKnown RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 RBM34P42696 430 aaKnown RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 MAGEA2P43356 314 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 KIR2DL2P43627 348 aaPredicted RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 SLC16A1P53985 500 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 HOXC5Q00444 222 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 SORDQ00796 357 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 TFF3Q07654 80 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 BLMHQ13867 455 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 LINC00114Q6XXX2 140 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 STK32CQ86UX6 486 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 LIX1LQ8IVB5 337 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 CBR4Q8N4T8 237 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 RELL2Q8NC24 303 aaPredicted RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 RNASE6Q93091 150 aaKnown RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 PRRC1Q96M27 445 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 BDH2Q9BUT1 245 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 OR11A1Q9GZK7 315 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 PLSCR4Q9NRQ2 329 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 ELOVL5Q9NYP7 299 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 DNAJB9Q9UBS3 223 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 OAZ3Q9UMX2 235 aa12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 SPTBN1Q01082 2364 aaKnown RBP12.48□□□□□ -0.41
PKNOX1-209ENST00000560448 TRAV36DV7A0A075B6V5 113 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 FAM90A27PA6NNH2 459 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 PDLIM1O00151 329 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 ZNF682O95780 498 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 ITGA2P17301 1181 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 CCNA2P20248 432 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 CDH12P55289 794 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 OR2B6P58173 313 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 TAS2R41P59536 307 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 RASGEF1BQ0VAM2 473 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 ST3GAL3Q11203 375 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 FOXF2Q12947 444 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 NPTX1Q15818 432 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 TTC33Q6PID6 262 aaPredicted RBP12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 INTS1Q8N201 2190 aaKnown RBP12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 CNEP1R1Q8N9A8 125 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 ACBD4Q8NC06 268 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 VANGL1Q8TAA9 524 aaPredicted RBP12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 ABHD3Q8WU67 409 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 HS6ST2Q96MM7 605 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 SPOCK3Q9BQ16 436 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 PSD2Q9BQI7 771 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 ZNF426Q9BUY5 554 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 ENKD1Q9H0I2 346 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 Q9H521 79 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 ANKRD19PQ9H560 264 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 PROCRQ9UNN8 238 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 KIAA1549Q9HCM3 1950 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 CACNA1CQ13936 2221 aa12.47□□□□□ -0.41
PKNOX1-209ENST00000560448 ZC3H12DA2A288 527 aaKnown RBP12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 MAGEA13PA6NCF6 341 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 AQP7P3A6NL99 342 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 CPSF4LA6NMK7 179 aaKnown RBP12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 A8MXE2 369 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 EEF1E1-BLOC1S5C9J1V9 151 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 EEF1E1O43324 174 aaKnown RBP12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 IMPDH2P12268 514 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 IGFBP2P18065 325 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 FPR1P21462 350 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 AGTR1P30556 359 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 EGR4Q05215 589 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 POU4F3Q15319 338 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 C6orf52Q5T4I8 152 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 TBPL2Q6SJ96 375 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 UGT2A3Q6UWM9 527 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 BEND4Q6ZU67 534 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 CYP4Z1Q86W10 505 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 SCAIQ8N9R8 606 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 ADPRHL1Q8NDY3 354 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 OR4D11Q8NGI4 311 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 ROBO4Q8WZ75 1007 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 STARD4Q96DR4 205 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 SLC41A3Q96GZ6 507 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 HSH2DQ96JZ2 352 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 UBAP1Q9NZ09 502 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 SLC7A7Q9UM01 511 aa12.46□□□□□ -0.41
PKNOX1-209ENST00000560448 RASD1Q9Y272 281 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms