RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 OR7A5Q15622 319 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 C3AR1Q16581 482 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 ZBED5Q49AG3 693 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 GXYLT1Q4G148 440 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 KRTCAP3Q53RY4 240 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 ZNF362Q5T0B9 420 aaPredicted RBP8.39□□□□□ -1.07
HERC1-206ENST00000559996 RASSF6Q6ZTQ3 369 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 ESPNLQ6ZVH7 1005 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 CCDC103Q8IW40 242 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 PARP8Q8N3A8 854 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 GALNT4Q8N4A0 578 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 TMEM99Q8N816 258 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 OR13C2Q8NGS9 318 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 OR10D3Q8NH80 312 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 MOSPD2Q8NHP6 518 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 PIGXQ8TBF5 258 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 MAGEE2Q8TD90 523 aaPredicted RBP8.39□□□□□ -1.07
HERC1-206ENST00000559996 GTPBP3Q969Y2 492 aaKnown RBP8.39□□□□□ -1.07
HERC1-206ENST00000559996 EME1Q96AY2 570 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 UCN2Q96RP3 112 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 MBOAT4Q96T53 435 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 RBM4BQ9BQ04 359 aaKnown RBP8.39□□□□□ -1.07
HERC1-206ENST00000559996 RBM4Q9BWF3 364 aaKnown RBP8.39□□□□□ -1.07
HERC1-206ENST00000559996 KLHL4Q9C0H6 718 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 RASSF4Q9H2L5 321 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 LDAHQ9H6V9 325 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 EGLN3Q9H6Z9 239 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 FKRPQ9H9S5 495 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 MRPL39Q9NYK5 338 aaKnown RBP8.39□□□□□ -1.07
HERC1-206ENST00000559996 B3GAT1Q9P2W7 334 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 ZNF229Q9UJW7 825 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 HIF3AQ9Y2N7 669 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 ZNF835Q9Y2P0 537 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 UNC119BA6NIH7 251 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 EFCAB9A8MZ26 197 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 M0R082 166 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 SULT2B1O00204 365 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 EIF1AYO14602 144 aaKnown RBP8.38□□□□□ -1.07
HERC1-206ENST00000559996 SMAD9O15198 467 aaKnown RBP8.38□□□□□ -1.07
HERC1-206ENST00000559996 CXCL13O43927 109 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 AKR7A3O95154 331 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 SNAP29O95721 258 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 MT-ATP6P00846 226 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 TFPIP10646 304 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 OSMP13725 252 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 HLA-DOBP13765 273 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 POU3F2P20265 443 aaPredicted RBP8.38□□□□□ -1.07
HERC1-206ENST00000559996 ENPP1P22413 925 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 IDUAP35475 653 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 AQP2P41181 271 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 MLLT10P55197 1068 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 CARD18P57730 90 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 ADARB1P78563 741 aaKnown RBP8.38□□□□□ -1.07
HERC1-206ENST00000559996 EFNB1P98172 346 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 CDK5Q00535 292 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 SRYQ05066 204 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 NPRL3Q12980 569 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 SGCBQ16585 318 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.38□□□□□ -1.07
HERC1-206ENST00000559996 RFX4Q33E94 735 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 HBMQ6B0K9 141 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 RTL6Q6ICC9 239 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 ACSM5Q6NUN0 579 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 FAM180AQ6UWF9 173 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 ZNF620Q6ZNG0 422 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 Q6ZPB1 254 aaPredicted RBP8.38□□□□□ -1.07
HERC1-206ENST00000559996 SEM1Q6ZVN7 128 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 RRM2BQ7LG56 351 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 GALNT5Q7Z7M9 940 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 CCDC71Q8IV32 467 aaPredicted RBP8.38□□□□□ -1.07
HERC1-206ENST00000559996 KDM8Q8N371 416 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 PACRGLQ8N7B6 248 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 CLDN22Q8N7P3 220 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 ZIC4Q8N9L1 334 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 LSM14AQ8ND56 463 aaKnown RBP8.38□□□□□ -1.07
HERC1-206ENST00000559996 OR5J2Q8NH18 312 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 OR51A7Q8NH64 312 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 OR2V1Q8NHB1 315 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 ZNF417Q8TAU3 575 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 ZPLD1Q8TCW7 415 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 SMPDL3BQ92485 455 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 SLC25A36Q96CQ1 311 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 DTNBP1Q96EV8 351 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 ZNF587Q96SQ5 575 aaPredicted RBP8.38□□□□□ -1.07
HERC1-206ENST00000559996 TUBA1CQ9BQE3 449 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 UCK2Q9BZX2 261 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 GRIP2Q9C0E4 1043 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 NANSQ9NR45 359 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 TMEM5Q9Y2B1 443 aa8.38□□□□□ -1.07
HERC1-206ENST00000559996 SPIN1Q9Y657 262 aaPredicted RBP8.38□□□□□ -1.07
HERC1-206ENST00000559996 IGHV3-15A0A0B4J1V0 119 aa8.37□□□□□ -1.07
HERC1-206ENST00000559996 LOC102725191A0A1B0GVB3 256 aa8.37□□□□□ -1.07
HERC1-206ENST00000559996 OR14I1A6ND48 311 aa8.37□□□□□ -1.07
HERC1-206ENST00000559996 AQP7P3A6NL99 342 aa8.37□□□□□ -1.07
HERC1-206ENST00000559996 GJE1A6NN92 205 aa8.37□□□□□ -1.07
HERC1-206ENST00000559996 ZNF716A6NP11 495 aa8.37□□□□□ -1.07
HERC1-206ENST00000559996 MCIDASD6RGH6 385 aa8.37□□□□□ -1.07
HERC1-206ENST00000559996 NPIPA2E9PIF3 369 aa8.37□□□□□ -1.07
HERC1-206ENST00000559996 NPIPA3F8WFD2 350 aa8.37□□□□□ -1.07
HERC1-206ENST00000559996 H0YJX3 145 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms